Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13200

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
2,907,770	+		LRK53_RS13195	0.61	-0.2
2,907,770	+		LRK53_RS13195	0.61	+0.0
2,907,771	-		LRK53_RS13195	0.61	-1.2
2,907,771	-		LRK53_RS13195	0.61	-1.8
2,907,846	-		LRK53_RS13195	0.65	+0.1
2,907,846	-		LRK53_RS13195	0.65	+1.5
2,907,857	+		LRK53_RS13195	0.66	-0.0
2,907,857	+		LRK53_RS13195	0.66	-0.4
2,907,858	-		LRK53_RS13195	0.66	+0.4
2,907,858	-		LRK53_RS13195	0.66	+1.1
2,908,001	+		LRK53_RS13195	0.73	-0.3
2,908,002	-		LRK53_RS13195	0.73	-0.5
2,908,016	+		LRK53_RS13195	0.74	+0.5
2,908,017	-		LRK53_RS13195	0.74	-0.6
2,908,100	+		LRK53_RS13195	0.78	-2.1
2,908,100	+		LRK53_RS13195	0.78	-0.9
2,908,100	+		LRK53_RS13195	0.78	-1.4
2,908,100	+		LRK53_RS13195	0.78	-0.6
2,908,101	-		LRK53_RS13195	0.78	-0.8
2,908,101	-		LRK53_RS13195	0.78	-1.2
2,908,101	-		LRK53_RS13195	0.78	+0.1
2,908,157	+		LRK53_RS13195	0.81	+1.7
2,908,158	-		LRK53_RS13195	0.81	-1.2
2,908,158	-		LRK53_RS13195	0.81	-0.5
2,908,158	-		LRK53_RS13195	0.81	-0.9
2,908,158	-		LRK53_RS13195	0.81	+1.8
2,908,166	+		LRK53_RS13195	0.81	-2.6
2,908,166	+		LRK53_RS13195	0.81	-2.0
2,908,166	+		LRK53_RS13195	0.81	+1.5
2,908,166	+		LRK53_RS13195	0.81	+0.8
2,908,166	+		LRK53_RS13195	0.81	-0.4
2,908,167	-		LRK53_RS13195	0.81	-0.6
2,908,275	-		LRK53_RS13195	0.87	+0.0
2,908,275	-		LRK53_RS13195	0.87	-0.6
2,908,275	-		LRK53_RS13195	0.87	+0.0
2,908,380	-				-0.1
2,908,437	+				-0.6
2,908,460	-				-1.0
2,908,460	-				-2.1
2,908,570	+				-0.6
2,908,570	+				+0.6
2,908,570	+				-2.6
2,908,570	+				-2.6
2,908,570	+				-0.3
2,908,570	+				-0.7
2,908,570	+				-2.4
2,908,570	+				-1.1
2,908,570	+				-2.9
2,908,570	+				-0.5
2,908,570	+				+2.8
2,908,570	+				-0.4
2,908,570	+				-2.5
2,908,570	+				+0.7
2,908,570	+				-0.2
2,908,570	+				-0.7
2,908,570	+				-0.5
2,908,570	+				-0.9
2,908,570	+				-0.2
2,908,570	+				-0.3
2,908,570	+				+1.8
2,908,570	+				-3.1
2,908,570	+				-0.2
2,908,570	+				+0.2
2,908,570	+				-0.8
2,908,570	+				+1.3
2,908,570	+				-1.9
2,908,570	+				+1.0
2,908,570	+				+0.3
2,908,570	+				+1.3
2,908,570	+				+0.2
2,908,570	+				-1.8
2,908,570	+				+1.8
2,908,570	+				-0.7
2,908,570	+				-1.7
2,908,570	+				-0.1
2,908,571	-				-0.5
2,908,571	-				-0.7
2,908,571	-				+1.5
2,908,571	-				-0.4
2,908,571	-				+1.3
2,908,571	-				-0.9
2,908,571	-				-1.3
2,908,571	-				+0.4
2,908,571	-				-1.0
2,908,571	-				-1.5
2,908,571	-				-1.4
2,908,571	-				+1.6
2,908,571	-				-2.1
2,908,571	-				-3.2
2,908,571	-				+0.0
2,908,571	-				-0.5
2,908,571	-				-1.7
2,908,571	-				-1.9
2,908,571	-				-1.5
2,908,571	-				-1.4
2,908,571	-				-0.2
2,908,571	-				-1.6
2,908,571	-				-0.9
2,908,571	-				-0.1
2,908,700	+				-0.8
2,908,700	+				-0.5
2,908,700	+				+1.4
2,908,700	+				-0.2
2,908,700	+				+0.3
2,908,700	+				-1.2
2,908,700	+				-0.7
2,908,700	+				+1.3
2,908,700	+				-2.0
2,908,700	+				-0.6
2,908,700	+				+0.4
2,908,700	+				-0.9
2,908,700	+				+0.0
2,908,700	+				-0.6
2,908,700	+				+0.7
2,908,700	+				-0.0
2,908,700	+				-2.1
2,908,700	+				-2.6
2,908,700	+				-0.6
2,908,700	+				-0.3
2,908,700	+				+0.3
2,908,700	+				-3.3
2,908,700	+				-1.7
2,908,700	+				+1.4
2,908,700	+				-0.6
2,908,700	+				-1.0
2,908,700	+				+0.5
2,908,700	+				+0.2
2,908,700	+				-1.1
2,908,700	+				-0.2
2,908,700	+				-1.1
2,908,700	+				-1.1
2,908,700	+				-1.6
2,908,700	+				-1.8
2,908,700	+				-2.7
2,908,701	-				-1.3
2,908,701	-				-2.4
2,908,701	-				-0.2
2,908,701	-				+1.9
2,908,701	-				-0.2
2,908,701	-				-3.0
2,908,701	-				-1.6
2,908,701	-				-1.4
2,908,701	-				-1.2
2,908,701	-				+3.4
2,908,701	-				-0.8
2,908,701	-				-0.7
2,908,701	-				-2.2
2,908,701	-				+0.7
2,908,701	-				-0.9
2,908,701	-				-0.6
2,908,701	-				-3.0
2,908,701	-				-0.4
2,908,701	-				-1.6
2,908,701	-				+1.4
2,908,701	-				-1.7
2,908,701	-				-1.0
2,908,701	-				-0.9
2,908,701	-				-0.2
2,908,701	-				-1.2
2,908,701	-				-0.1
2,908,701	-				-1.6
2,908,701	-				-1.7
2,908,701	-				-1.1
2,908,701	-				+1.2
2,908,701	-				+1.6
2,908,701	-				-0.6
2,908,701	-				-0.5
2,908,701	-				-1.3
2,908,701	-				-1.9
2,908,701	-				-1.6
2,908,701	-				+0.4
2,908,701	-				-1.8
2,908,701	-				-0.0
2,908,701	-				-0.5
2,908,701	-				-0.5
2,908,701	-				-0.3
2,908,702	+				+1.6
2,908,702	+				+2.5
2,908,702	+				-1.0
2,908,702	+				+0.4
2,908,702	+				-2.5
2,908,702	+				-0.8
2,908,702	+				-2.0
2,908,702	+				+1.0
2,908,702	+				+0.3
2,908,702	+				-0.5
2,908,702	+				+1.0
2,908,702	+				-1.8
2,908,702	+				+0.9
2,908,702	+				-1.7
2,908,702	+				-2.0
2,908,702	+				+0.4
2,908,702	+				-0.6
2,908,702	+				-0.3
2,908,702	+				-0.0
2,908,703	-				+0.0
2,908,703	-				-0.6
2,908,703	-				-0.8
2,908,703	-				-0.5
2,908,703	-				-2.1
2,908,703	-				+0.8
2,908,703	-				-0.6
2,908,703	-				-0.7
2,908,703	-				-0.3
2,908,703	-				+0.3
2,908,703	-				-2.2
2,908,703	-				-0.1
2,908,703	-				-2.2
2,908,703	-				-0.5
2,908,703	-				-1.2
2,908,703	-				-1.0
2,908,703	-				-1.2
2,908,703	-				+1.3
2,908,703	-				-1.2
2,908,718	+				+0.7
2,908,739	+		LRK53_RS13200	0.22	+0.3
2,908,739	+		LRK53_RS13200	0.22	+0.5
2,908,739	+		LRK53_RS13200	0.22	-3.3
2,908,739	+		LRK53_RS13200	0.22	+1.3
2,908,739	+		LRK53_RS13200	0.22	-0.3
2,908,739	+		LRK53_RS13200	0.22	-3.4
2,908,739	+		LRK53_RS13200	0.22	+0.5
2,908,739	+		LRK53_RS13200	0.22	-0.6
2,908,739	+		LRK53_RS13200	0.22	+0.6
2,908,740	-		LRK53_RS13200	0.23	+0.0
2,908,740	-		LRK53_RS13200	0.23	+0.8
2,908,740	-		LRK53_RS13200	0.23	+1.1
2,908,750	-		LRK53_RS13200	0.29	-1.8
2,908,792	-		LRK53_RS13200	0.55	+0.3
2,908,888	+				-1.0
2,908,888	+				+1.3
2,908,888	+				-2.5
2,908,889	-				-1.5
2,908,889	-				-1.1
2,908,889	-				-1.7
2,908,889	-				-0.7
2,908,992	+				-0.6
2,908,992	+				+0.6
2,908,992	+				-0.3
2,908,992	+				+0.0
2,908,992	+				-0.6
2,908,992	+				-0.7
2,908,992	+				-1.0
2,908,992	+				+1.4
2,908,993	-				-1.3
2,908,993	-				-2.0
2,908,993	-				-1.1
2,908,993	-				-0.9
2,908,993	-				+1.1
2,908,993	-				-0.9
2,909,037	+				-0.6
2,909,037	+				-1.1
2,909,134	+		LRK53_RS13205	0.10	-0.4
2,909,135	-		LRK53_RS13205	0.11	-1.6
2,909,135	-		LRK53_RS13205	0.11	-1.3
2,909,360	+		LRK53_RS13205	0.69	-0.7
2,909,360	+		LRK53_RS13205	0.69	+2.0
2,909,360	+		LRK53_RS13205	0.69	-0.3
2,909,360	+		LRK53_RS13205	0.69	-1.0
2,909,360	+		LRK53_RS13205	0.69	-1.4
2,909,361	-		LRK53_RS13205	0.70	-1.8
2,909,361	-		LRK53_RS13205	0.70	+1.1
2,909,361	-		LRK53_RS13205	0.70	-1.5
2,909,361	-		LRK53_RS13205	0.70	-1.2
2,909,457	+				-0.9
2,909,457	+				-0.5
2,909,457	+				+1.0
2,909,458	-				-3.1
2,909,458	-				+0.5
2,909,458	-				-1.6