Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12390

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
2,750,742	+				+0.3
2,750,762	+				-0.7
2,750,762	+				-1.4
2,750,762	+				-1.9
2,750,762	+				-0.4
2,750,763	-				-1.1
2,750,763	-				-0.5
2,750,763	-				-3.0
2,750,763	-				-0.8
2,750,763	-				-0.2
2,750,763	-				+0.0
2,750,763	-				-0.7
2,750,763	-				-1.2
2,750,769	+				-1.1
2,750,769	+				-1.9
2,750,769	+				+0.1
2,750,769	+				-0.5
2,750,769	+				-1.9
2,750,769	+				-1.0
2,750,770	-				-0.9
2,750,770	-				+0.1
2,750,770	-				+1.5
2,750,770	-				-1.7
2,750,770	-				-2.6
2,750,770	-				+0.6
2,750,811	+				+0.6
2,750,812	-				-0.7
2,750,812	-				+0.5
2,750,812	-				-0.5
2,750,812	-				+1.3
2,751,261	+		LRK53_RS12385	0.55	+0.3
2,751,261	+		LRK53_RS12385	0.55	+0.2
2,751,261	+		LRK53_RS12385	0.55	+0.8
2,751,261	+		LRK53_RS12385	0.55	-1.4
2,751,261	+		LRK53_RS12385	0.55	-0.0
2,751,261	+		LRK53_RS12385	0.55	-0.2
2,751,261	+		LRK53_RS12385	0.55	+1.1
2,751,262	-		LRK53_RS12385	0.55	+0.7
2,751,262	-		LRK53_RS12385	0.55	+2.3
2,751,262	-		LRK53_RS12385	0.55	-0.2
2,751,262	-		LRK53_RS12385	0.55	-0.2
2,751,262	-		LRK53_RS12385	0.55	+0.3
2,751,262	-		LRK53_RS12385	0.55	-0.9
2,751,262	-		LRK53_RS12385	0.55	-1.8
2,751,367	+		LRK53_RS12385	0.71	+1.6
2,751,369	+		LRK53_RS12385	0.71	-0.2
2,751,369	+		LRK53_RS12385	0.71	-1.4
2,751,369	+		LRK53_RS12385	0.71	-0.5
2,751,369	+		LRK53_RS12385	0.71	-0.4
2,751,370	-		LRK53_RS12385	0.71	-3.0
2,751,370	-		LRK53_RS12385	0.71	-2.1
2,751,370	-		LRK53_RS12385	0.71	-0.5
2,751,370	-		LRK53_RS12385	0.71	-0.2
2,751,370	-		LRK53_RS12385	0.71	-0.1
2,751,370	-		LRK53_RS12385	0.71	+0.6
2,751,370	-		LRK53_RS12385	0.71	-2.0
2,751,370	-		LRK53_RS12385	0.71	-1.7
2,751,370	-		LRK53_RS12385	0.71	-1.9
2,751,370	-		LRK53_RS12385	0.71	+0.3
2,751,370	-		LRK53_RS12385	0.71	-2.7
2,751,634	+				-0.2
2,751,634	+				+0.2
2,751,634	+				+1.0
2,751,634	+				-0.7
2,751,634	+				-0.9
2,751,634	+				-0.5
2,751,634	+				+0.2
2,751,634	+				-2.0
2,751,634	+				-1.4
2,751,634	+				+1.6
2,751,634	+				-0.3
2,751,634	+				+0.8
2,751,634	+				-0.9
2,751,634	+				-1.9
2,751,634	+				-0.8
2,751,634	+				-0.5
2,751,634	+				+0.5
2,751,634	+				+0.6
2,751,635	-				-0.2
2,751,635	-				-0.3
2,751,635	-				-0.6
2,751,635	-				-1.7
2,751,635	-				-0.0
2,751,635	-				-0.5
2,751,635	-				+1.2
2,751,635	-				-2.0
2,751,635	-				-0.1
2,751,635	-				-2.6
2,751,635	-				-2.0
2,751,635	-				-0.1
2,751,658	-				-0.5
2,752,113	+		LRK53_RS12390	0.44	-0.6
2,752,113	+		LRK53_RS12390	0.44	-0.2
2,752,113	+		LRK53_RS12390	0.44	-0.4
2,752,113	+		LRK53_RS12390	0.44	-0.7
2,752,113	+		LRK53_RS12390	0.44	+0.6
2,752,113	+		LRK53_RS12390	0.44	-0.2
2,752,113	+		LRK53_RS12390	0.44	+1.6
2,752,114	-		LRK53_RS12390	0.44	-2.9
2,752,114	-		LRK53_RS12390	0.44	+0.6
2,752,114	-		LRK53_RS12390	0.44	+1.0
2,752,236	+		LRK53_RS12390	0.55	-1.1
2,752,236	+		LRK53_RS12390	0.55	-0.9
2,752,236	+		LRK53_RS12390	0.55	-1.5
2,752,236	+		LRK53_RS12390	0.55	-1.9
2,752,237	-		LRK53_RS12390	0.55	-0.7
2,752,237	-		LRK53_RS12390	0.55	+0.6
2,752,237	-		LRK53_RS12390	0.55	+2.1
2,752,237	-		LRK53_RS12390	0.55	-0.5
2,752,470	+		LRK53_RS12390	0.78	+0.5
2,752,470	+		LRK53_RS12390	0.78	-0.3
2,752,470	+		LRK53_RS12390	0.78	-0.2
2,752,470	+		LRK53_RS12390	0.78	-1.0
2,752,470	+		LRK53_RS12390	0.78	-1.2
2,752,470	+		LRK53_RS12390	0.78	-0.1
2,752,470	+		LRK53_RS12390	0.78	-2.3
2,752,470	+		LRK53_RS12390	0.78	-0.0
2,752,470	+		LRK53_RS12390	0.78	-2.0
2,752,470	+		LRK53_RS12390	0.78	-0.9
2,752,470	+		LRK53_RS12390	0.78	+0.5
2,752,470	+		LRK53_RS12390	0.78	+1.1
2,752,470	+		LRK53_RS12390	0.78	-1.2
2,752,470	+		LRK53_RS12390	0.78	-1.3
2,752,470	+		LRK53_RS12390	0.78	-0.1
2,752,471	-		LRK53_RS12390	0.78	+0.7
2,752,471	-		LRK53_RS12390	0.78	-0.2
2,752,471	-		LRK53_RS12390	0.78	-3.6
2,752,471	-		LRK53_RS12390	0.78	-0.7
2,752,471	-		LRK53_RS12390	0.78	-0.4
2,752,471	-		LRK53_RS12390	0.78	+0.5
2,752,471	-		LRK53_RS12390	0.78	+0.7
2,752,471	-		LRK53_RS12390	0.78	-0.5
2,752,471	-		LRK53_RS12390	0.78	-1.7
2,752,471	-		LRK53_RS12390	0.78	-0.9
2,752,608	-				-1.1
2,752,608	-				-0.3
2,752,608	-				+0.8
2,752,691	+				+0.1
2,752,691	+				-0.9
2,752,691	+				-1.5
2,752,692	-				-1.3
2,752,692	-				+1.4
2,752,781	-				-1.6
2,752,781	-				+0.8
2,752,839	-		LRK53_RS12395	0.13	-0.2
2,752,863	-		LRK53_RS12395	0.16	-1.9
2,752,916	+		LRK53_RS12395	0.24	-0.2
2,752,916	+		LRK53_RS12395	0.24	-1.8
2,752,916	+		LRK53_RS12395	0.24	-0.4
2,752,916	+		LRK53_RS12395	0.24	-2.5
2,752,916	+		LRK53_RS12395	0.24	-0.3
2,752,916	+		LRK53_RS12395	0.24	-0.3
2,752,917	-		LRK53_RS12395	0.24	-2.2
2,752,917	-		LRK53_RS12395	0.24	+1.5
2,752,917	-		LRK53_RS12395	0.24	+2.1
2,752,917	-		LRK53_RS12395	0.24	-0.8
2,752,917	-		LRK53_RS12395	0.24	-0.7
2,752,917	-		LRK53_RS12395	0.24	-1.4
2,752,917	-		LRK53_RS12395	0.24	+0.8
2,752,917	-		LRK53_RS12395	0.24	-0.3
2,752,917	-		LRK53_RS12395	0.24	-0.9
2,752,994	+		LRK53_RS12395	0.35	+0.8
2,752,995	-		LRK53_RS12395	0.35	+1.5
2,753,021	+		LRK53_RS12395	0.39	-0.7
2,753,022	-		LRK53_RS12395	0.39	+0.0
2,753,022	-		LRK53_RS12395	0.39	+1.1
2,753,036	+		LRK53_RS12395	0.41	-0.8
2,753,036	+		LRK53_RS12395	0.41	-0.1
2,753,036	+		LRK53_RS12395	0.41	-0.5
2,753,036	+		LRK53_RS12395	0.41	-0.4
2,753,037	-		LRK53_RS12395	0.41	-0.2
2,753,037	-		LRK53_RS12395	0.41	+0.9
2,753,037	-		LRK53_RS12395	0.41	-1.4
2,753,037	-		LRK53_RS12395	0.41	-0.8
2,753,037	-		LRK53_RS12395	0.41	-0.8
2,753,037	-		LRK53_RS12395	0.41	-0.3
2,753,165	+		LRK53_RS12395	0.59	+1.0
2,753,165	+		LRK53_RS12395	0.59	+0.3
2,753,165	+		LRK53_RS12395	0.59	+0.2
2,753,165	+		LRK53_RS12395	0.59	-2.9
2,753,165	+		LRK53_RS12395	0.59	-0.5
2,753,165	+		LRK53_RS12395	0.59	+1.8
2,753,166	-		LRK53_RS12395	0.59	-1.3
2,753,166	-		LRK53_RS12395	0.59	-1.3
2,753,166	-		LRK53_RS12395	0.59	+0.5
2,753,277	+		LRK53_RS12395	0.75	-0.2
2,753,277	+		LRK53_RS12395	0.75	-0.5
2,753,277	+		LRK53_RS12395	0.75	+1.8
2,753,277	+		LRK53_RS12395	0.75	-0.7
2,753,278	-		LRK53_RS12395	0.75	-0.8
2,753,278	-		LRK53_RS12395	0.75	-0.0
2,753,318	+		LRK53_RS12395	0.81	+0.9
2,753,318	+		LRK53_RS12395	0.81	-0.2
2,753,318	+		LRK53_RS12395	0.81	-1.0
2,753,319	-		LRK53_RS12395	0.81	-0.9
2,753,319	-		LRK53_RS12395	0.81	-1.3
2,753,319	-		LRK53_RS12395	0.81	-0.7
2,753,381	+				-1.6
2,753,381	+				-1.2
2,753,381	+				-2.3
2,753,381	+				-1.4
2,753,381	+				-2.9
2,753,456	+				+0.8
2,753,456	+				-1.5
2,753,456	+				-0.4
2,753,456	+				+1.0
2,753,456	+				-0.4
2,753,457	-				-0.1
2,753,457	-				-0.6
2,753,457	-				+0.4
2,753,457	-				+0.5
2,753,457	-				-1.7
2,753,485	+				-1.5
2,753,485	+				-0.4
2,753,485	+				-1.9
2,753,485	+				+1.9
2,753,485	+				-0.9
2,753,485	+				+1.0
2,753,486	-				+0.2
2,753,486	-				-0.4
2,753,486	-				-2.0
2,753,486	-				-0.4
2,753,486	-				-0.0
2,753,486	-				+0.6
2,753,486	-				-1.0
2,753,486	-				-0.1
2,753,645	+				+0.3
2,753,645	+				-0.5
2,753,645	+				+0.6
2,753,645	+				-2.0
2,753,645	+				+0.7
2,753,645	+				-0.6
2,753,645	+				-0.4
2,753,645	+				+0.2
2,753,646	-				-0.2
2,753,646	-				+0.4
2,753,646	-				-0.7
2,753,646	-				+0.2
2,753,646	-				+0.1
2,753,646	-				-0.9
2,753,646	-				-0.4
2,753,646	-				-0.5