Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12380

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
2,747,763	+		LRK53_RS12375	0.59	-0.8
2,747,763	+		LRK53_RS12375	0.59	+1.4
2,747,764	-		LRK53_RS12375	0.59	-2.2
2,747,764	-		LRK53_RS12375	0.59	-0.4
2,747,835	+		LRK53_RS12375	0.63	-0.8
2,747,835	+		LRK53_RS12375	0.63	+0.7
2,747,835	+		LRK53_RS12375	0.63	+0.2
2,747,836	-		LRK53_RS12375	0.64	-0.7
2,747,838	+		LRK53_RS12375	0.64	-0.0
2,747,838	+		LRK53_RS12375	0.64	-1.0
2,747,838	+		LRK53_RS12375	0.64	-0.4
2,747,838	+		LRK53_RS12375	0.64	-1.4
2,747,838	+		LRK53_RS12375	0.64	+1.1
2,747,838	+		LRK53_RS12375	0.64	-0.9
2,747,838	+		LRK53_RS12375	0.64	+0.2
2,747,838	+		LRK53_RS12375	0.64	+1.0
2,747,838	+		LRK53_RS12375	0.64	-0.4
2,747,838	+		LRK53_RS12375	0.64	-1.9
2,747,838	+		LRK53_RS12375	0.64	+1.3
2,747,838	+		LRK53_RS12375	0.64	-1.0
2,747,838	+		LRK53_RS12375	0.64	+0.9
2,747,838	+		LRK53_RS12375	0.64	-0.8
2,747,838	+		LRK53_RS12375	0.64	-0.1
2,747,838	+		LRK53_RS12375	0.64	-1.3
2,747,838	+		LRK53_RS12375	0.64	-1.4
2,747,839	-		LRK53_RS12375	0.64	+1.4
2,747,839	-		LRK53_RS12375	0.64	+1.2
2,747,839	-		LRK53_RS12375	0.64	-1.7
2,747,839	-		LRK53_RS12375	0.64	-1.0
2,747,839	-		LRK53_RS12375	0.64	-0.5
2,747,839	-		LRK53_RS12375	0.64	+0.4
2,747,839	-		LRK53_RS12375	0.64	+0.2
2,747,839	-		LRK53_RS12375	0.64	-0.5
2,747,839	-		LRK53_RS12375	0.64	-0.5
2,747,839	-		LRK53_RS12375	0.64	+0.1
2,747,839	-		LRK53_RS12375	0.64	+1.0
2,747,839	-		LRK53_RS12375	0.64	-0.8
2,747,839	-		LRK53_RS12375	0.64	-0.0
2,747,839	-		LRK53_RS12375	0.64	-1.1
2,747,839	-		LRK53_RS12375	0.64	-0.8
2,748,027	+		LRK53_RS12375	0.76	-1.3
2,748,027	+		LRK53_RS12375	0.76	+1.2
2,748,027	+		LRK53_RS12375	0.76	-0.1
2,748,028	-		LRK53_RS12375	0.76	-0.2
2,748,060	+		LRK53_RS12375	0.78	-2.4
2,748,060	+		LRK53_RS12375	0.78	-1.5
2,748,060	+		LRK53_RS12375	0.78	-0.9
2,748,060	+		LRK53_RS12375	0.78	+0.0
2,748,060	+		LRK53_RS12375	0.78	-1.1
2,748,060	+		LRK53_RS12375	0.78	-2.7
2,748,060	+		LRK53_RS12375	0.78	-2.1
2,748,061	-		LRK53_RS12375	0.78	+2.0
2,748,061	-		LRK53_RS12375	0.78	-0.9
2,748,061	-		LRK53_RS12375	0.78	-1.2
2,748,061	-		LRK53_RS12375	0.78	+0.5
2,748,061	-		LRK53_RS12375	0.78	-1.1
2,748,061	-		LRK53_RS12375	0.78	-0.3
2,748,111	+		LRK53_RS12375	0.82	-0.7
2,748,111	+		LRK53_RS12375	0.82	-1.5
2,748,364	+				-1.6
2,748,364	+				-0.5
2,748,364	+				-1.2
2,748,365	-				-0.1
2,748,365	-				-1.5
2,748,365	-				+0.5
2,748,473	+				+1.0
2,748,528	+				-0.3
2,748,528	+				-2.3
2,748,528	+				-0.4
2,748,528	+				+0.2
2,748,528	+				-1.0
2,748,528	+				+0.4
2,748,528	+				+0.9
2,748,528	+				+0.4
2,748,529	-				+0.5
2,748,529	-				-0.4
2,748,529	-				-1.0
2,748,529	-				-3.4
2,748,529	-				-0.5
2,748,529	-				-1.1
2,748,529	-				-1.0
2,748,529	-				-1.0
2,748,529	-				-2.8
2,748,529	-				-1.2
2,748,529	-				+0.5
2,748,549	+				+2.5
2,748,549	+				-2.7
2,748,549	+				-0.4
2,748,549	+				-3.5
2,748,549	+				-2.2
2,748,549	+				-1.1
2,748,549	+				-1.4
2,748,549	+				-1.7
2,748,549	+				-0.9
2,748,549	+				-0.1
2,748,835	-				-1.7
2,748,835	-				+1.2
2,748,835	-				-0.8
2,748,835	-				+0.0
2,748,876	+		LRK53_RS12380	0.12	-1.1
2,748,876	+		LRK53_RS12380	0.12	+4.1
2,748,876	+		LRK53_RS12380	0.12	-1.1
2,748,876	+		LRK53_RS12380	0.12	-0.7
2,748,876	+		LRK53_RS12380	0.12	-0.2
2,748,877	-		LRK53_RS12380	0.12	-1.5
2,748,877	-		LRK53_RS12380	0.12	-0.4
2,748,877	-		LRK53_RS12380	0.12	-1.4
2,748,877	-		LRK53_RS12380	0.12	+0.3
2,748,877	-		LRK53_RS12380	0.12	+1.1
2,748,877	-		LRK53_RS12380	0.12	-1.5
2,748,877	-		LRK53_RS12380	0.12	-0.0
2,748,877	-		LRK53_RS12380	0.12	-1.2
2,748,877	-		LRK53_RS12380	0.12	+0.8
2,748,981	+		LRK53_RS12380	0.17	-2.0
2,748,981	+		LRK53_RS12380	0.17	+1.9
2,748,981	+		LRK53_RS12380	0.17	-0.5
2,748,982	-		LRK53_RS12380	0.17	+1.5
2,749,044	+		LRK53_RS12380	0.19	-0.5
2,749,044	+		LRK53_RS12380	0.19	-1.4
2,749,044	+		LRK53_RS12380	0.19	-0.2
2,749,044	+		LRK53_RS12380	0.19	-1.0
2,749,045	-		LRK53_RS12380	0.19	-0.5
2,749,176	+		LRK53_RS12380	0.25	-1.2
2,749,177	-		LRK53_RS12380	0.25	-0.4
2,749,368	+		LRK53_RS12380	0.34	-1.2
2,749,401	+		LRK53_RS12380	0.36	-1.1
2,749,401	+		LRK53_RS12380	0.36	-1.7
2,749,401	+		LRK53_RS12380	0.36	-1.5
2,749,401	+		LRK53_RS12380	0.36	-0.3
2,749,401	+		LRK53_RS12380	0.36	-1.2
2,749,402	-		LRK53_RS12380	0.36	+1.2
2,749,506	+		LRK53_RS12380	0.40	-0.2
2,749,506	+		LRK53_RS12380	0.40	-0.0
2,749,507	-		LRK53_RS12380	0.40	-0.5
2,749,507	-		LRK53_RS12380	0.40	-0.7
2,749,507	-		LRK53_RS12380	0.40	-0.2
2,749,507	-		LRK53_RS12380	0.40	-1.9
2,749,507	-		LRK53_RS12380	0.40	-1.5
2,749,507	-		LRK53_RS12380	0.40	+3.1
2,749,507	-		LRK53_RS12380	0.40	+0.5
2,749,734	+		LRK53_RS12380	0.51	-1.3
2,749,734	+		LRK53_RS12380	0.51	-0.8
2,749,734	+		LRK53_RS12380	0.51	-0.7
2,749,735	-		LRK53_RS12380	0.51	-1.0
2,749,735	-		LRK53_RS12380	0.51	+1.2
2,749,809	+		LRK53_RS12380	0.54	-0.9
2,749,809	+		LRK53_RS12380	0.54	-2.1
2,749,809	+		LRK53_RS12380	0.54	+0.8
2,749,810	-		LRK53_RS12380	0.54	-1.8
2,749,854	+		LRK53_RS12380	0.56	-1.7
2,749,855	-		LRK53_RS12380	0.56	-0.5
2,749,855	-		LRK53_RS12380	0.56	-1.0
2,749,978	-		LRK53_RS12380	0.62	-1.6
2,749,978	-		LRK53_RS12380	0.62	-0.7
2,750,025	+		LRK53_RS12380	0.64	+0.1
2,750,025	+		LRK53_RS12380	0.64	-1.1
2,750,025	+		LRK53_RS12380	0.64	-1.9
2,750,026	-		LRK53_RS12380	0.64	-1.2
2,750,026	-		LRK53_RS12380	0.64	-0.9
2,750,026	-		LRK53_RS12380	0.64	-2.0
2,750,026	-		LRK53_RS12380	0.64	-0.0
2,750,026	-		LRK53_RS12380	0.64	-1.3
2,750,026	-		LRK53_RS12380	0.64	+0.8
2,750,133	+		LRK53_RS12380	0.69	-1.0
2,750,133	+		LRK53_RS12380	0.69	+0.4
2,750,133	+		LRK53_RS12380	0.69	+2.8
2,750,133	+		LRK53_RS12380	0.69	-1.9
2,750,133	+		LRK53_RS12380	0.69	-0.7
2,750,133	+		LRK53_RS12380	0.69	-0.9
2,750,134	-		LRK53_RS12380	0.69	-0.4
2,750,134	-		LRK53_RS12380	0.69	+2.3
2,750,134	-		LRK53_RS12380	0.69	+1.0
2,750,134	-		LRK53_RS12380	0.69	-0.8
2,750,134	-		LRK53_RS12380	0.69	-1.3
2,750,178	+		LRK53_RS12380	0.71	-0.5
2,750,178	+		LRK53_RS12380	0.71	-1.8
2,750,179	-		LRK53_RS12380	0.71	+0.6
2,750,179	-		LRK53_RS12380	0.71	+1.4
2,750,358	+		LRK53_RS12380	0.79	-1.0
2,750,359	-		LRK53_RS12380	0.79	+0.1
2,750,359	-		LRK53_RS12380	0.79	-2.4
2,750,364	+		LRK53_RS12380	0.79	-1.4
2,750,364	+		LRK53_RS12380	0.79	+1.0
2,750,364	+		LRK53_RS12380	0.79	-1.0
2,750,364	+		LRK53_RS12380	0.79	-1.5
2,750,364	+		LRK53_RS12380	0.79	-4.3
2,750,364	+		LRK53_RS12380	0.79	-0.0
2,750,364	+		LRK53_RS12380	0.79	-0.8
2,750,364	+		LRK53_RS12380	0.79	+0.5
2,750,364	+		LRK53_RS12380	0.79	-0.8
2,750,364	+		LRK53_RS12380	0.79	+0.1
2,750,364	+		LRK53_RS12380	0.79	-0.9
2,750,364	+		LRK53_RS12380	0.79	-0.7
2,750,364	+		LRK53_RS12380	0.79	-1.6
2,750,364	+		LRK53_RS12380	0.79	+0.1
2,750,364	+		LRK53_RS12380	0.79	+0.8
2,750,364	+		LRK53_RS12380	0.79	-0.4
2,750,364	+		LRK53_RS12380	0.79	+0.3
2,750,364	+		LRK53_RS12380	0.79	-1.5
2,750,364	+		LRK53_RS12380	0.79	-1.7
2,750,364	+		LRK53_RS12380	0.79	-2.2
2,750,364	+		LRK53_RS12380	0.79	-0.7
2,750,364	+		LRK53_RS12380	0.79	-0.8
2,750,365	-		LRK53_RS12380	0.79	-1.7
2,750,365	-		LRK53_RS12380	0.79	+0.9
2,750,365	-		LRK53_RS12380	0.79	-1.2
2,750,365	-		LRK53_RS12380	0.79	-0.4
2,750,365	-		LRK53_RS12380	0.79	+0.5
2,750,365	-		LRK53_RS12380	0.79	-1.4
2,750,365	-		LRK53_RS12380	0.79	-1.2
2,750,365	-		LRK53_RS12380	0.79	-2.1
2,750,365	-		LRK53_RS12380	0.79	-2.3
2,750,365	-		LRK53_RS12380	0.79	-2.2
2,750,365	-		LRK53_RS12380	0.79	-1.0
2,750,365	-		LRK53_RS12380	0.79	-0.4
2,750,365	-		LRK53_RS12380	0.79	-0.3
2,750,365	-		LRK53_RS12380	0.79	-1.1
2,750,365	-		LRK53_RS12380	0.79	-0.9
2,750,365	-		LRK53_RS12380	0.79	-0.2
2,750,365	-		LRK53_RS12380	0.79	-3.2
2,750,610	+				+2.3
2,750,610	+				-0.6
2,750,610	+				+0.4
2,750,610	+				-0.2
2,750,610	+				+0.4
2,750,610	+				+1.3
2,750,610	+				-0.3
2,750,610	+				-1.2
2,750,610	+				+0.3
2,750,610	+				-0.9
2,750,610	+				-0.2
2,750,610	+				+0.2
2,750,610	+				-0.5
2,750,610	+				-1.4
2,750,611	-				-0.4
2,750,611	-				-2.0
2,750,611	-				-2.3
2,750,611	-				+0.9
2,750,611	-				+0.6
2,750,611	-				-0.5
2,750,611	-				+1.4
2,750,611	-				-3.3
2,750,611	-				-2.3
2,750,611	-				-0.2
2,750,613	+				+0.2
2,750,613	+				-0.4
2,750,614	-				-0.7
2,750,742	+				+0.3
2,750,743	-				+2.0
2,750,762	+				-0.7
2,750,762	+				-1.4
2,750,762	+				-1.9
2,750,762	+				-0.4
2,750,763	-				-1.1
2,750,763	-				-0.5
2,750,763	-				-3.0
2,750,763	-				-0.8
2,750,763	-				-0.2
2,750,763	-				+0.0
2,750,763	-				-0.7
2,750,763	-				-1.2
2,750,769	+				-1.1
2,750,769	+				-1.9
2,750,769	+				+0.1
2,750,769	+				-0.5
2,750,769	+				-1.9
2,750,769	+				-1.0
2,750,770	-				-0.9
2,750,770	-				+0.1
2,750,770	-				+1.5
2,750,770	-				-1.7
2,750,770	-				-2.6
2,750,770	-				+0.6
2,750,811	+				+0.6
2,750,812	-				-0.7
2,750,812	-				+0.5
2,750,812	-				-0.5
2,750,812	-				+1.3
2,751,261	+		LRK53_RS12385	0.55	+0.3
2,751,261	+		LRK53_RS12385	0.55	+0.2
2,751,261	+		LRK53_RS12385	0.55	+0.8
2,751,261	+		LRK53_RS12385	0.55	-1.4
2,751,261	+		LRK53_RS12385	0.55	-0.0
2,751,261	+		LRK53_RS12385	0.55	-0.2
2,751,261	+		LRK53_RS12385	0.55	+1.1
2,751,262	-		LRK53_RS12385	0.55	+0.7
2,751,262	-		LRK53_RS12385	0.55	+2.3
2,751,262	-		LRK53_RS12385	0.55	-0.2
2,751,262	-		LRK53_RS12385	0.55	-0.2
2,751,262	-		LRK53_RS12385	0.55	+0.3
2,751,262	-		LRK53_RS12385	0.55	-0.9
2,751,262	-		LRK53_RS12385	0.55	-1.8
2,751,367	+		LRK53_RS12385	0.71	+1.6
2,751,369	+		LRK53_RS12385	0.71	-0.2
2,751,369	+		LRK53_RS12385	0.71	-1.4
2,751,369	+		LRK53_RS12385	0.71	-0.5
2,751,369	+		LRK53_RS12385	0.71	+0.2
2,751,369	+		LRK53_RS12385	0.71	-0.4
2,751,370	-		LRK53_RS12385	0.71	-3.0
2,751,370	-		LRK53_RS12385	0.71	-2.1
2,751,370	-		LRK53_RS12385	0.71	-0.5
2,751,370	-		LRK53_RS12385	0.71	-0.2
2,751,370	-		LRK53_RS12385	0.71	-0.1
2,751,370	-		LRK53_RS12385	0.71	+0.6
2,751,370	-		LRK53_RS12385	0.71	-2.0
2,751,370	-		LRK53_RS12385	0.71	-1.7
2,751,370	-		LRK53_RS12385	0.71	-1.9
2,751,370	-		LRK53_RS12385	0.71	+0.3
2,751,370	-		LRK53_RS12385	0.71	-2.7
2,751,634	+				-0.2
2,751,634	+				+0.2
2,751,634	+				+1.0
2,751,634	+				-0.7
2,751,634	+				-0.9
2,751,634	+				-0.5
2,751,634	+				+0.2
2,751,634	+				+0.2
2,751,634	+				-2.0
2,751,634	+				-1.4
2,751,634	+				+1.6
2,751,634	+				-0.3
2,751,634	+				+0.8
2,751,634	+				-0.9
2,751,634	+				-1.9
2,751,634	+				-0.8
2,751,634	+				-0.5
2,751,634	+				+0.5
2,751,634	+				+0.6
2,751,635	-				-0.2
2,751,635	-				-0.3
2,751,635	-				-0.2
2,751,635	-				-0.6
2,751,635	-				-1.7
2,751,635	-				-0.0
2,751,635	-				-0.5
2,751,635	-				+1.2
2,751,635	-				-2.0
2,751,635	-				-0.1
2,751,635	-				-2.6
2,751,635	-				-2.0
2,751,635	-				-0.1
2,751,658	-				-0.5