Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05250

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,228,289	+		LRK53_RS05245	0.41	-1.4
1,228,289	+		LRK53_RS05245	0.41	+0.5
1,228,289	+		LRK53_RS05245	0.41	-3.0
1,228,289	+		LRK53_RS05245	0.41	-1.8
1,228,289	+		LRK53_RS05245	0.41	-0.4
1,228,289	+		LRK53_RS05245	0.41	-1.8
1,228,289	+		LRK53_RS05245	0.41	-0.1
1,228,290	-		LRK53_RS05245	0.41	-2.7
1,228,290	-		LRK53_RS05245	0.41	-0.1
1,228,290	-		LRK53_RS05245	0.41	+0.1
1,228,290	-		LRK53_RS05245	0.41	-0.2
1,228,290	-		LRK53_RS05245	0.41	+0.4
1,228,290	-		LRK53_RS05245	0.41	-1.0
1,228,290	-		LRK53_RS05245	0.41	-2.5
1,228,433	+		LRK53_RS05245	0.52	+0.8
1,228,433	+		LRK53_RS05245	0.52	+0.2
1,228,433	+		LRK53_RS05245	0.52	-0.8
1,228,538	+		LRK53_RS05245	0.59	-0.4
1,228,539	-		LRK53_RS05245	0.60	-1.4
1,228,539	-		LRK53_RS05245	0.60	-0.6
1,228,779	+		LRK53_RS05245	0.77	-1.8
1,228,780	-		LRK53_RS05245	0.77	-1.9
1,228,780	-		LRK53_RS05245	0.77	-0.4
1,228,780	-		LRK53_RS05245	0.77	-3.3
1,228,780	-		LRK53_RS05245	0.77	-0.1
1,228,781	+		LRK53_RS05245	0.78	-0.2
1,228,781	+		LRK53_RS05245	0.78	-0.8
1,228,782	-		LRK53_RS05245	0.78	-0.6
1,228,782	-		LRK53_RS05245	0.78	-2.7
1,228,782	-		LRK53_RS05245	0.78	-2.8
1,228,799	+		LRK53_RS05245	0.79	-1.2
1,228,799	+		LRK53_RS05245	0.79	+0.2
1,228,817	+		LRK53_RS05245	0.80	-0.1
1,228,817	+		LRK53_RS05245	0.80	-0.5
1,228,817	+		LRK53_RS05245	0.80	+0.2
1,228,818	-		LRK53_RS05245	0.80	-1.4
1,228,818	-		LRK53_RS05245	0.80	+0.4
1,228,818	-		LRK53_RS05245	0.80	-1.1
1,228,818	-		LRK53_RS05245	0.80	-1.2
1,228,818	-		LRK53_RS05245	0.80	-0.8
1,228,818	-		LRK53_RS05245	0.80	+2.1
1,228,818	-		LRK53_RS05245	0.80	+0.2
1,228,818	-		LRK53_RS05245	0.80	-1.4
1,229,035	-				-2.6
1,229,084	+				-0.0
1,229,085	+				-0.4
1,229,085	+				-0.1
1,229,085	+				+0.1
1,229,085	+				-0.1
1,229,085	+				-2.2
1,229,085	+				-0.9
1,229,085	+				+0.2
1,229,085	+				+1.1
1,229,085	+				-1.0
1,229,085	+				-2.3
1,229,085	+				-0.6
1,229,085	+				+0.5
1,229,086	-				-1.9
1,229,086	-				-0.6
1,229,086	-				-0.1
1,229,086	-				+0.2
1,229,086	-				+0.0
1,229,086	-				-0.0
1,229,086	-				-0.4
1,229,086	-				-1.6
1,229,086	-				-0.2
1,229,086	-				-1.6
1,229,086	-				-0.1
1,229,086	-				-1.8
1,229,086	-				+1.1
1,229,086	-				-1.6
1,229,086	-				-0.1
1,229,179	-				-0.1
1,229,368	+		LRK53_RS05250	0.30	+0.4
1,229,368	+		LRK53_RS05250	0.30	-0.7
1,229,369	-		LRK53_RS05250	0.30	-2.4
1,229,369	-		LRK53_RS05250	0.30	+0.8
1,229,369	-		LRK53_RS05250	0.30	+0.2
1,229,369	-		LRK53_RS05250	0.30	-0.4
1,229,369	-		LRK53_RS05250	0.30	-1.4
1,229,369	-		LRK53_RS05250	0.30	-0.4
1,229,369	-		LRK53_RS05250	0.30	-1.5
1,229,369	-		LRK53_RS05250	0.30	-1.4
1,229,369	-		LRK53_RS05250	0.30	-1.6
1,229,369	-		LRK53_RS05250	0.30	-0.1
1,229,369	-		LRK53_RS05250	0.30	-0.6
1,229,380	+		LRK53_RS05250	0.33	-1.3
1,229,381	-		LRK53_RS05250	0.33	+0.4
1,229,381	-		LRK53_RS05250	0.33	-1.1
1,229,381	-		LRK53_RS05250	0.33	+0.3
1,229,381	-		LRK53_RS05250	0.33	+0.4
1,229,381	-		LRK53_RS05250	0.33	-3.2
1,229,381	-		LRK53_RS05250	0.33	-0.4
1,229,381	-		LRK53_RS05250	0.33	-0.7
1,229,381	-		LRK53_RS05250	0.33	-0.6
1,229,381	-		LRK53_RS05250	0.33	-0.2
1,229,381	-		LRK53_RS05250	0.33	-2.6
1,229,474	-		LRK53_RS05250	0.55	-3.1
1,229,474	-		LRK53_RS05250	0.55	-1.4
1,229,545	+		LRK53_RS05250	0.72	+0.4
1,229,545	+		LRK53_RS05250	0.72	-3.2
1,229,545	+		LRK53_RS05250	0.72	-1.1
1,229,545	+		LRK53_RS05250	0.72	-1.8
1,229,545	+		LRK53_RS05250	0.72	-0.1
1,229,545	+		LRK53_RS05250	0.72	+1.3
1,229,546	-		LRK53_RS05250	0.73	-0.1
1,229,546	-		LRK53_RS05250	0.73	-0.9
1,229,546	-		LRK53_RS05250	0.73	-2.9
1,229,546	-		LRK53_RS05250	0.73	-1.6
1,229,575	+		LRK53_RS05250	0.80	-2.2
1,229,575	+		LRK53_RS05250	0.80	-1.3
1,229,575	+		LRK53_RS05250	0.80	-2.4
1,229,575	+		LRK53_RS05250	0.80	-0.9
1,229,575	+		LRK53_RS05250	0.80	-3.0
1,229,575	+		LRK53_RS05250	0.80	-1.8
1,229,575	+		LRK53_RS05250	0.80	-0.6
1,229,575	+		LRK53_RS05250	0.80	-1.6
1,229,575	+		LRK53_RS05250	0.80	-1.1
1,229,576	-		LRK53_RS05250	0.80	-0.6
1,229,576	-		LRK53_RS05250	0.80	-1.5
1,229,576	-		LRK53_RS05250	0.80	+0.4
1,229,576	-		LRK53_RS05250	0.80	-3.5
1,229,576	-		LRK53_RS05250	0.80	-1.2
1,229,576	-		LRK53_RS05250	0.80	-0.7
1,229,576	-		LRK53_RS05250	0.80	+1.9
1,229,582	-		LRK53_RS05250	0.81	-0.4
1,229,732	-				-0.9
1,229,732	-				-1.4
1,229,780	-				+0.3
1,229,780	-				-2.6
1,229,780	-				-0.9
1,229,873	+				-0.6
1,229,873	+				-3.4
1,229,873	+				+0.2
1,229,873	+				-0.6
1,229,873	+				+0.1
1,229,873	+				-2.6
1,229,873	+				-0.4
1,229,873	+				-1.5
1,229,873	+				-1.1
1,229,874	-				-1.8
1,229,874	-				-1.1
1,229,874	-				+0.7
1,229,874	-				-0.9
1,229,874	-				-0.9
1,229,874	-				-2.7
1,229,874	-				-2.6
1,229,874	-				-2.5
1,229,874	-				+0.8
1,230,432	+		LRK53_RS05255	0.67	-0.7
1,230,432	+		LRK53_RS05255	0.67	+0.4
1,230,432	+		LRK53_RS05255	0.67	-1.3
1,230,432	+		LRK53_RS05255	0.67	-0.4
1,230,432	+		LRK53_RS05255	0.67	+1.0
1,230,432	+		LRK53_RS05255	0.67	-1.8
1,230,433	-		LRK53_RS05255	0.68	-0.1
1,230,433	-		LRK53_RS05255	0.68	-2.7
1,230,433	-		LRK53_RS05255	0.68	-0.7
1,230,433	-		LRK53_RS05255	0.68	-1.4
1,230,433	-		LRK53_RS05255	0.68	-0.8
1,230,433	-		LRK53_RS05255	0.68	-0.2
1,230,433	-		LRK53_RS05255	0.68	-0.9
1,230,440	+		LRK53_RS05255	0.68	-1.5
1,230,440	+		LRK53_RS05255	0.68	+1.4
1,230,440	+		LRK53_RS05255	0.68	+0.2
1,230,440	+		LRK53_RS05255	0.68	-0.6
1,230,440	+		LRK53_RS05255	0.68	-1.2
1,230,440	+		LRK53_RS05255	0.68	-0.4
1,230,440	+		LRK53_RS05255	0.68	+0.2
1,230,441	-		LRK53_RS05255	0.68	+0.4
1,230,441	-		LRK53_RS05255	0.68	-1.2
1,230,441	-		LRK53_RS05255	0.68	+0.5
1,230,441	-		LRK53_RS05255	0.68	-0.1
1,230,441	-		LRK53_RS05255	0.68	-2.2
1,230,441	-		LRK53_RS05255	0.68	-1.4
1,230,441	-		LRK53_RS05255	0.68	-0.1
1,230,441	-		LRK53_RS05255	0.68	-1.1
1,230,441	-		LRK53_RS05255	0.68	+2.8
1,230,441	-		LRK53_RS05255	0.68	-1.5