Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03663

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
4,094,990	-				-0.5
4,095,024	+				-0.5
4,095,037	-				-1.3
4,095,038	+				-2.1
4,095,079	+				-1.2
4,095,105	+				-0.3
4,095,112	+				+1.0
4,095,130	-		MIT1002_03661	0.13	-0.9
4,095,130	-		MIT1002_03661	0.13	+0.5
4,095,145	+		MIT1002_03661	0.16	+1.6
4,095,153	-		MIT1002_03661	0.17	+0.5
4,095,162	+		MIT1002_03661	0.19	+2.0
4,095,171	-		MIT1002_03661	0.21	-1.1
4,095,214	+		MIT1002_03661	0.29	-0.7
4,095,391	+		MIT1002_03661	0.64	-0.0
4,095,391	+		MIT1002_03661	0.64	+1.3
4,095,391	+		MIT1002_03661	0.64	+0.3
4,095,404	-		MIT1002_03661	0.66	+0.5
4,095,504	+		MIT1002_03661	0.85	+0.5
4,095,512	-		MIT1002_03661	0.87	+0.8
4,095,513	-		MIT1002_03661	0.87	+0.8
4,095,827	-		MIT1002_03662	0.16	+1.5
4,095,827	-		MIT1002_03662	0.16	+0.8
4,095,905	-		MIT1002_03662	0.69	+0.3
4,095,970	-				-1.1
4,096,071	+		MIT1002_03663	0.32	-0.3
4,096,073	+		MIT1002_03663	0.33	+1.3
4,096,081	-		MIT1002_03663	0.35	+0.2
4,096,091	-		MIT1002_03663	0.37	+0.5
4,096,110	+		MIT1002_03663	0.42	-0.4
4,096,110	+		MIT1002_03663	0.42	-1.5
4,096,110	+		MIT1002_03663	0.42	+0.3
4,096,110	+		MIT1002_03663	0.42	-0.0
4,096,110	+		MIT1002_03663	0.42	+0.2
4,096,110	+		MIT1002_03663	0.42	-1.0
4,096,110	+		MIT1002_03663	0.42	+1.9
4,096,110	+		MIT1002_03663	0.42	+1.1
4,096,110	+		MIT1002_03663	0.42	+0.7
4,096,110	+		MIT1002_03663	0.42	+1.6
4,096,110	+		MIT1002_03663	0.42	+0.1
4,096,110	+		MIT1002_03663	0.42	-0.2
4,096,118	-		MIT1002_03663	0.44	-0.2
4,096,118	-		MIT1002_03663	0.44	-2.1
4,096,118	-		MIT1002_03663	0.44	-0.4
4,096,118	-		MIT1002_03663	0.44	-0.3
4,096,118	-		MIT1002_03663	0.44	-1.1
4,096,118	-		MIT1002_03663	0.44	-1.3
4,096,118	-		MIT1002_03663	0.44	+0.1
4,096,118	-		MIT1002_03663	0.44	+0.1
4,096,118	-		MIT1002_03663	0.44	-1.5
4,096,118	-		MIT1002_03663	0.44	+0.0
4,096,118	-		MIT1002_03663	0.44	-0.0
4,096,189	-		MIT1002_03663	0.63	+0.6
4,096,233	-		MIT1002_03663	0.74	-0.1
4,096,271	+		MIT1002_03663	0.84	+1.3
4,096,279	-		MIT1002_03663	0.86	-0.7
4,096,281	+		MIT1002_03663	0.87	+0.2
4,096,281	+		MIT1002_03663	0.87	-0.5
4,096,281	+		MIT1002_03663	0.87	+0.5
4,096,289	-		MIT1002_03663	0.89	-0.9
4,096,298	+				-0.1
4,096,907	-		MIT1002_03664	0.83	-1.5
4,097,046	-				-0.6
4,097,082	-				+0.1
4,097,157	+				-2.4
4,097,165	-				+0.3