Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03352

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
3,749,216	+		MIT1002_03351	0.67	+0.0
3,749,224	-		MIT1002_03351	0.67	+0.5
3,749,230	+		MIT1002_03351	0.67	-2.4
3,749,270	+		MIT1002_03351	0.69	+0.4
3,749,282	+		MIT1002_03351	0.69	-0.3
3,749,295	-		MIT1002_03351	0.70	-0.3
3,749,295	-		MIT1002_03351	0.70	-0.1
3,749,360	+		MIT1002_03351	0.72	-0.2
3,749,360	+		MIT1002_03351	0.72	-0.5
3,749,368	-		MIT1002_03351	0.72	-0.7
3,749,368	-		MIT1002_03351	0.72	-0.2
3,749,368	-		MIT1002_03351	0.72	-0.1
3,749,370	+		MIT1002_03351	0.72	+1.7
3,749,370	+		MIT1002_03351	0.72	-2.7
3,749,370	+		MIT1002_03351	0.72	-0.1
3,749,370	+		MIT1002_03351	0.72	+0.7
3,749,378	-		MIT1002_03351	0.73	+1.1
3,749,378	-		MIT1002_03351	0.73	-0.5
3,749,378	-		MIT1002_03351	0.73	+1.1
3,749,378	-		MIT1002_03351	0.73	-0.8
3,749,378	-		MIT1002_03351	0.73	+1.7
3,749,386	-		MIT1002_03351	0.73	+0.4
3,749,405	+		MIT1002_03351	0.74	+1.0
3,749,405	+		MIT1002_03351	0.74	-1.5
3,749,413	-		MIT1002_03351	0.74	+1.1
3,749,426	+		MIT1002_03351	0.75	-0.8
3,749,434	-		MIT1002_03351	0.75	-0.8
3,749,439	+		MIT1002_03351	0.75	+1.4
3,749,439	+		MIT1002_03351	0.75	+1.1
3,749,439	+		MIT1002_03351	0.75	+0.4
3,749,447	-		MIT1002_03351	0.75	-0.9
3,749,447	-		MIT1002_03351	0.75	-0.3
3,749,447	-		MIT1002_03351	0.75	-2.0
3,749,447	-		MIT1002_03351	0.75	+1.4
3,749,447	-		MIT1002_03351	0.75	+0.2
3,749,449	+		MIT1002_03351	0.75	-0.7
3,749,472	-		MIT1002_03351	0.76	+0.1
3,749,501	+		MIT1002_03351	0.77	+0.0
3,749,501	+		MIT1002_03351	0.77	+0.2
3,749,509	-		MIT1002_03351	0.78	-3.0
3,749,567	-		MIT1002_03351	0.80	-0.2
3,749,569	+		MIT1002_03351	0.80	+0.3
3,749,611	+		MIT1002_03351	0.82	+2.7
3,749,629	+		MIT1002_03351	0.82	-0.8
3,749,654	+		MIT1002_03351	0.83	+1.2
3,749,697	+		MIT1002_03351	0.85	-1.0
3,749,783	-		MIT1002_03351	0.88	+0.4
3,749,785	+		MIT1002_03351	0.88	+2.4
3,749,791	-		MIT1002_03351	0.88	-0.2
3,749,793	+		MIT1002_03351	0.88	+0.2
3,749,803	-		MIT1002_03351	0.89	+0.7
3,749,892	-				-1.8
3,749,924	+				-0.8
3,749,924	+				+0.0
3,749,953	-				+0.5
3,750,028	+				+1.2
3,750,030	+				+0.5
3,750,036	-				-1.1
3,750,064	+				-0.0
3,750,064	+				-0.2
3,750,191	-				+0.1
3,750,198	+				+0.1
3,750,243	-				-0.4
3,750,316	-		MIT1002_03352	0.12	+0.7
3,750,451	-		MIT1002_03352	0.29	-1.3
3,750,513	+		MIT1002_03352	0.36	+0.9
3,750,627	-		MIT1002_03352	0.50	+0.3
3,750,641	+		MIT1002_03352	0.52	+0.9
3,750,698	+		MIT1002_03352	0.59	+0.0
3,750,706	-		MIT1002_03352	0.60	+0.7
3,750,706	-		MIT1002_03352	0.60	-0.1
3,750,706	-		MIT1002_03352	0.60	-0.0
3,750,754	+		MIT1002_03352	0.65	+0.1
3,750,754	+		MIT1002_03352	0.65	+0.8
3,750,754	+		MIT1002_03352	0.65	+1.8
3,750,815	-		MIT1002_03352	0.73	+0.2
3,750,886	-		MIT1002_03352	0.82	+0.4
3,750,889	-		MIT1002_03352	0.82	-0.5
3,751,022	+				+1.7
3,751,047	-				+0.0
3,751,060	+				+0.3
3,751,083	+				+0.7
3,751,112	+				+0.3
3,751,127	+				+0.1
3,751,188	+		MIT1002_03353	0.11	-0.8
3,751,188	+		MIT1002_03353	0.11	-0.0
3,751,193	+		MIT1002_03353	0.12	-2.1
3,751,215	+		MIT1002_03353	0.13	+2.4
3,751,223	-		MIT1002_03353	0.14	+0.1
3,751,296	+		MIT1002_03353	0.20	-0.4
3,751,301	+		MIT1002_03353	0.21	+1.0
3,751,391	+		MIT1002_03353	0.28	+0.6
3,751,393	-		MIT1002_03353	0.29	+0.8
3,751,396	+		MIT1002_03353	0.29	-0.8
3,751,404	-		MIT1002_03353	0.30	-0.0
3,751,469	+		MIT1002_03353	0.35	+0.4
3,751,528	+		MIT1002_03353	0.40	+1.2
3,751,538	-		MIT1002_03353	0.41	+0.5
3,751,600	-		MIT1002_03353	0.46	-0.9
3,751,688	+		MIT1002_03353	0.54	-0.5
3,751,743	+		MIT1002_03353	0.58	+0.1
3,751,743	+		MIT1002_03353	0.58	-1.7
3,751,751	-		MIT1002_03353	0.59	+2.4
3,751,751	-		MIT1002_03353	0.59	-0.8
3,751,751	-		MIT1002_03353	0.59	+0.8
3,751,762	-		MIT1002_03353	0.60	+0.3
3,751,762	-		MIT1002_03353	0.60	-0.2
3,751,771	+		MIT1002_03353	0.61	+1.6
3,751,797	-		MIT1002_03353	0.63	-1.0
3,751,804	+		MIT1002_03353	0.64	-0.7
3,751,818	+		MIT1002_03353	0.65	+0.1
3,751,882	-		MIT1002_03353	0.70	-0.4
3,751,902	-		MIT1002_03353	0.72	+1.0
3,751,978	+		MIT1002_03353	0.78	-2.1
3,751,986	-		MIT1002_03353	0.79	+0.3