Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03097

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
3,451,546	-		MIT1002_03096	0.60	-0.5
3,451,566	-		MIT1002_03096	0.61	-1.5
3,451,566	-		MIT1002_03096	0.61	+1.7
3,451,673	-		MIT1002_03096	0.67	-1.1
3,451,684	+		MIT1002_03096	0.67	-1.7
3,451,701	-		MIT1002_03096	0.68	-0.8
3,451,758	-		MIT1002_03096	0.72	-1.5
3,451,772	+		MIT1002_03096	0.73	-0.9
3,451,772	+		MIT1002_03096	0.73	+1.2
3,451,827	+		MIT1002_03096	0.76	+0.2
3,451,858	+		MIT1002_03096	0.78	-0.2
3,451,858	+		MIT1002_03096	0.78	+1.0
3,451,858	+		MIT1002_03096	0.78	+0.1
3,451,866	-		MIT1002_03096	0.78	-1.3
3,451,866	-		MIT1002_03096	0.78	+0.0
3,451,866	-		MIT1002_03096	0.78	+1.0
3,451,866	-		MIT1002_03096	0.78	+0.6
3,451,866	-		MIT1002_03096	0.78	-0.0
3,452,042	+		MIT1002_03096	0.88	+0.6
3,452,055	-		MIT1002_03096	0.89	-1.0
3,452,157	-				-1.5
3,452,196	+				+0.3
3,452,204	-				-1.6
3,452,291	+				+1.0
3,452,291	+				-1.1
3,452,304	+				+1.2
3,452,304	+				-1.7
3,452,312	-				+0.7
3,452,314	+				+0.9
3,452,322	-				+1.0
3,452,337	+				-0.4
3,452,337	+				-0.8
3,452,345	-				+1.3
3,452,345	-				+0.9
3,452,352	+				-1.0
3,452,352	+				+0.3
3,452,352	+				+1.7
3,452,352	-				-0.3
3,452,355	-				+1.5
3,452,365	-				+0.4
3,452,424	-				-0.9
3,452,424	-				-0.2
3,452,613	-				-0.6
3,452,630	+		MIT1002_03097	0.12	-1.8
3,452,683	-		MIT1002_03097	0.20	-0.2
3,452,752	+		MIT1002_03097	0.30	-2.6
3,452,760	-		MIT1002_03097	0.31	-1.7
3,452,806	+		MIT1002_03097	0.38	+0.3
3,452,815	-		MIT1002_03097	0.40	-0.3
3,452,941	+		MIT1002_03097	0.58	-0.4
3,452,946	+		MIT1002_03097	0.59	+0.5
3,452,969	+		MIT1002_03097	0.62	-0.2
3,452,977	-		MIT1002_03097	0.63	-1.3
3,453,043	+		MIT1002_03097	0.73	-0.3
3,453,043	+		MIT1002_03097	0.73	-0.3
3,453,051	-		MIT1002_03097	0.74	+0.4
3,453,051	-		MIT1002_03097	0.74	+0.7
3,453,051	-		MIT1002_03097	0.74	-1.4
3,453,079	+		MIT1002_03097	0.78	-0.6
3,453,088	-		MIT1002_03097	0.80	-0.3
3,453,115	+		MIT1002_03097	0.84	+1.0
3,453,135	-		MIT1002_03097	0.86	-1.5
3,453,183	-				-1.2
3,453,193	-				-1.4
3,453,193	-				+1.5
3,453,200	-				-0.3
3,453,216	+				+0.2
3,453,279	+				-0.6
3,453,281	+				-0.1
3,453,284	-				-2.1
3,453,424	-		MIT1002_03098	0.14	-2.1
3,453,450	-		MIT1002_03098	0.16	-0.5
3,453,450	-		MIT1002_03098	0.16	-2.6
3,453,530	-		MIT1002_03098	0.22	+1.4
3,453,530	-		MIT1002_03098	0.22	-0.6
3,453,630	+		MIT1002_03098	0.29	+2.0
3,453,669	-		MIT1002_03098	0.32	-0.8
3,453,673	+		MIT1002_03098	0.32	+0.3
3,453,674	+		MIT1002_03098	0.32	+0.7
3,453,674	+		MIT1002_03098	0.32	-0.2
3,453,682	-		MIT1002_03098	0.33	-0.9
3,453,682	-		MIT1002_03098	0.33	-0.1
3,453,721	+		MIT1002_03098	0.36	-0.6
3,453,729	-		MIT1002_03098	0.36	+0.7
3,453,729	-		MIT1002_03098	0.36	+0.6
3,453,739	-		MIT1002_03098	0.37	-1.4
3,453,777	+		MIT1002_03098	0.40	+0.9
3,453,801	-		MIT1002_03098	0.41	-1.2
3,453,956	+		MIT1002_03098	0.52	+1.1
3,454,007	+		MIT1002_03098	0.56	-0.7
3,454,007	+		MIT1002_03098	0.56	-0.3
3,454,007	+		MIT1002_03098	0.56	-2.1
3,454,015	-		MIT1002_03098	0.57	-0.3
3,454,015	-		MIT1002_03098	0.57	-0.7
3,454,032	-		MIT1002_03098	0.58	+0.9
3,454,096	+		MIT1002_03098	0.62	-0.4
3,454,185	+		MIT1002_03098	0.69	+0.1
3,454,193	+		MIT1002_03098	0.69	-0.1