Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02866

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
3,179,695	+		MIT1002_02865	0.56	+0.4
3,179,710	-		MIT1002_02865	0.57	-1.2
3,179,737	+		MIT1002_02865	0.58	-1.4
3,179,812	+		MIT1002_02865	0.62	+0.8
3,179,857	-		MIT1002_02865	0.65	-0.6
3,179,912	-		MIT1002_02865	0.68	-0.0
3,179,996	-		MIT1002_02865	0.72	-1.4
3,180,001	+		MIT1002_02865	0.72	-0.3
3,180,001	-		MIT1002_02865	0.72	+0.1
3,180,007	-		MIT1002_02865	0.73	-0.6
3,180,017	-		MIT1002_02865	0.73	+0.6
3,180,024	-		MIT1002_02865	0.74	+1.0
3,180,064	+		MIT1002_02865	0.76	-0.9
3,180,064	-		MIT1002_02865	0.76	-0.5
3,180,140	-		MIT1002_02865	0.80	+0.3
3,180,147	+		MIT1002_02865	0.80	-0.9
3,180,149	+		MIT1002_02865	0.80	+1.6
3,180,156	-		MIT1002_02865	0.80	-1.6
3,180,214	+		MIT1002_02865	0.83	-1.3
3,180,216	+		MIT1002_02865	0.84	+1.1
3,180,222	-		MIT1002_02865	0.84	-1.3
3,180,282	-		MIT1002_02865	0.87	-1.5
3,180,282	-		MIT1002_02865	0.87	-0.9
3,180,282	-		MIT1002_02865	0.87	+1.5
3,180,287	-		MIT1002_02865	0.87	+0.4
3,180,289	+		MIT1002_02865	0.87	+0.7
3,180,297	-		MIT1002_02865	0.88	-0.4
3,180,297	-		MIT1002_02865	0.88	-0.7
3,180,325	+		MIT1002_02865	0.89	-0.3
3,180,338	-				-0.4
3,180,452	+				-0.4
3,180,452	+				-0.2
3,180,452	+				-1.9
3,180,460	-				+1.9
3,180,460	-				-1.1
3,180,471	+				-0.2
3,180,584	-				+0.7
3,180,585	+				-1.1
3,180,597	+				-0.1
3,180,602	+				-0.3
3,180,628	-				+0.3
3,180,751	+		MIT1002_02866	0.13	-0.5
3,180,753	-		MIT1002_02866	0.13	-0.5
3,180,787	-		MIT1002_02866	0.16	-0.0
3,180,795	-		MIT1002_02866	0.17	+0.2
3,180,849	-		MIT1002_02866	0.22	+0.7
3,180,859	-		MIT1002_02866	0.23	-1.4
3,180,901	+		MIT1002_02866	0.27	-0.3
3,180,992	-		MIT1002_02866	0.35	+0.2
3,180,994	+		MIT1002_02866	0.35	-0.8
3,180,994	+		MIT1002_02866	0.35	+0.4
3,180,994	+		MIT1002_02866	0.35	-0.1
3,180,994	+		MIT1002_02866	0.35	+0.2
3,181,001	-		MIT1002_02866	0.36	-1.1
3,181,002	-		MIT1002_02866	0.36	-1.1
3,181,002	-		MIT1002_02866	0.36	+0.9
3,181,051	-		MIT1002_02866	0.40	+1.1
3,181,112	-		MIT1002_02866	0.46	-1.8
3,181,112	-		MIT1002_02866	0.46	-1.7
3,181,173	-		MIT1002_02866	0.52	+1.1
3,181,187	-		MIT1002_02866	0.53	-0.6
3,181,226	+		MIT1002_02866	0.57	+1.5
3,181,365	-		MIT1002_02866	0.70	-0.9
3,181,365	-		MIT1002_02866	0.70	-0.6
3,181,380	-		MIT1002_02866	0.71	-0.2
3,181,402	-		MIT1002_02866	0.73	+1.7
3,181,411	+		MIT1002_02866	0.74	-1.2
3,181,419	-		MIT1002_02866	0.75	+1.1
3,181,448	+		MIT1002_02866	0.77	+3.3
3,181,512	-		MIT1002_02866	0.83	+0.2
3,181,542	+		MIT1002_02866	0.86	+2.1
3,181,548	-		MIT1002_02866	0.86	+0.1
3,181,725	+				-0.3
3,181,750	+				-0.6
3,181,835	-		MIT1002_02867	0.11	+1.4
3,181,835	-		MIT1002_02867	0.11	-2.1
3,181,895	+		MIT1002_02867	0.15	-0.3
3,181,930	+		MIT1002_02867	0.17	+0.9
3,181,930	+		MIT1002_02867	0.17	-1.5
3,181,937	+		MIT1002_02867	0.18	-0.3
3,181,938	-		MIT1002_02867	0.18	+0.8
3,181,938	-		MIT1002_02867	0.18	+0.5
3,181,944	-		MIT1002_02867	0.18	-0.0
3,181,953	+		MIT1002_02867	0.19	-1.0
3,181,973	+		MIT1002_02867	0.20	-2.5
3,181,984	+		MIT1002_02867	0.21	+0.6
3,181,984	+		MIT1002_02867	0.21	-0.1
3,182,004	+		MIT1002_02867	0.22	+0.7
3,182,020	+		MIT1002_02867	0.24	+0.9
3,182,039	+		MIT1002_02867	0.25	-1.0
3,182,070	+		MIT1002_02867	0.27	+0.7
3,182,120	-		MIT1002_02867	0.30	-0.7
3,182,125	-		MIT1002_02867	0.31	+0.0
3,182,176	+		MIT1002_02867	0.34	-0.1
3,182,184	-		MIT1002_02867	0.35	-0.7
3,182,184	-		MIT1002_02867	0.35	-1.2
3,182,184	-		MIT1002_02867	0.35	-2.2
3,182,189	-		MIT1002_02867	0.35	-1.4
3,182,237	+		MIT1002_02867	0.38	-0.1
3,182,256	+		MIT1002_02867	0.39	-0.8
3,182,256	+		MIT1002_02867	0.39	-0.5
3,182,273	+		MIT1002_02867	0.41	+1.1
3,182,281	-		MIT1002_02867	0.41	-0.1
3,182,339	+		MIT1002_02867	0.45	-1.4
3,182,346	+		MIT1002_02867	0.45	-0.8
3,182,346	+		MIT1002_02867	0.45	-1.2
3,182,354	-		MIT1002_02867	0.46	-0.2
3,182,354	-		MIT1002_02867	0.46	-2.4
3,182,386	+		MIT1002_02867	0.48	-0.4
3,182,418	+		MIT1002_02867	0.50	-0.8
3,182,432	+		MIT1002_02867	0.51	-0.8
3,182,445	-		MIT1002_02867	0.52	-0.1
3,182,445	-		MIT1002_02867	0.52	-0.5
3,182,447	-		MIT1002_02867	0.52	-0.4
3,182,665	+		MIT1002_02867	0.67	-0.3