Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02780

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
3,082,916	+				+0.5
3,082,924	-				-1.0
3,082,924	-				+0.3
3,082,998	+				+1.4
3,083,023	-				-0.4
3,083,137	+		MIT1002_02780	0.14	-0.9
3,083,142	+		MIT1002_02780	0.14	+0.2
3,083,145	-		MIT1002_02780	0.15	+2.7
3,083,200	-		MIT1002_02780	0.19	+0.7
3,083,227	+		MIT1002_02780	0.21	+0.7
3,083,267	-		MIT1002_02780	0.24	-1.2
3,083,344	+		MIT1002_02780	0.29	+0.3
3,083,405	+		MIT1002_02780	0.34	+0.9
3,083,405	+		MIT1002_02780	0.34	-0.3
3,083,413	-		MIT1002_02780	0.34	+0.2
3,083,430	-		MIT1002_02780	0.36	+0.1
3,083,487	+		MIT1002_02780	0.40	+0.2
3,083,495	-		MIT1002_02780	0.40	-0.7
3,083,530	+		MIT1002_02780	0.43	-0.4
3,083,590	+		MIT1002_02780	0.47	+1.6
3,083,714	+		MIT1002_02780	0.57	+0.9
3,083,714	+		MIT1002_02780	0.57	+1.3
3,083,722	-		MIT1002_02780	0.57	-0.0
3,083,774	+		MIT1002_02780	0.61	+0.1
3,083,812	+		MIT1002_02780	0.64	-1.2
3,083,812	-		MIT1002_02780	0.64	-1.1
3,083,814	-		MIT1002_02780	0.64	-2.0
3,083,815	-		MIT1002_02780	0.64	+0.1
3,083,820	-		MIT1002_02780	0.64	+0.9
3,083,916	-		MIT1002_02780	0.72	+0.1
3,083,916	-		MIT1002_02780	0.72	-0.1
3,083,926	-		MIT1002_02780	0.72	+2.1
3,083,944	+		MIT1002_02780	0.74	-0.5
3,083,984	+		MIT1002_02780	0.77	+0.1
3,084,061	+		MIT1002_02780	0.82	-0.3
3,084,062	-		MIT1002_02780	0.82	+1.4
3,084,088	-		MIT1002_02780	0.84	+0.3
3,084,088	-		MIT1002_02780	0.84	+0.7
3,084,090	+		MIT1002_02780	0.84	-1.4
3,084,138	+		MIT1002_02780	0.88	-0.0
3,084,140	-		MIT1002_02780	0.88	-0.2
3,084,184	-				-2.1
3,084,199	+				-0.5
3,084,199	+				-0.8
3,084,207	-				+0.2
3,084,207	-				+1.3
3,084,270	-				-0.4
3,084,389	-				+1.3
3,084,431	+				+0.6
3,084,454	+		MIT1002_02781	0.12	-0.5
3,084,454	+		MIT1002_02781	0.12	-0.7
3,084,522	+		MIT1002_02781	0.18	-2.5
3,084,635	+		MIT1002_02781	0.28	-1.7
3,084,635	+		MIT1002_02781	0.28	-0.0
3,084,645	+		MIT1002_02781	0.28	+1.3
3,084,653	-		MIT1002_02781	0.29	-1.7
3,084,671	+		MIT1002_02781	0.31	-0.7
3,084,712	+		MIT1002_02781	0.34	+1.9
3,084,881	+		MIT1002_02781	0.49	-1.2
3,084,881	+		MIT1002_02781	0.49	+0.1
3,084,881	+		MIT1002_02781	0.49	+1.7
3,084,881	+		MIT1002_02781	0.49	-0.6
3,084,881	+		MIT1002_02781	0.49	+0.3
3,084,921	+		MIT1002_02781	0.52	-0.1
3,084,969	-		MIT1002_02781	0.56	+0.2
3,085,011	+		MIT1002_02781	0.60	-0.1
3,085,019	-		MIT1002_02781	0.61	-0.5
3,085,019	-		MIT1002_02781	0.61	+0.8
3,085,146	+		MIT1002_02781	0.72	+0.7
3,085,227	-		MIT1002_02781	0.79	+0.1
3,085,234	+		MIT1002_02781	0.79	+0.0
3,085,239	-		MIT1002_02781	0.80	-1.2
3,085,259	+		MIT1002_02781	0.81	+0.9
3,085,286	-		MIT1002_02781	0.84	-1.7