Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02751

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
3,053,049	+				+1.1
3,053,098	-		MIT1002_02750	0.10	-1.0
3,053,098	-		MIT1002_02750	0.10	+0.0
3,053,236	+		MIT1002_02750	0.26	-1.9
3,053,256	+		MIT1002_02750	0.28	+0.3
3,053,386	+		MIT1002_02750	0.42	-2.9
3,053,428	+		MIT1002_02750	0.47	+1.1
3,053,564	+		MIT1002_02750	0.62	-0.1
3,053,572	-		MIT1002_02750	0.63	+0.4
3,053,604	-		MIT1002_02750	0.66	-1.2
3,053,626	+		MIT1002_02750	0.69	+1.0
3,053,634	-		MIT1002_02750	0.70	+0.3
3,053,676	+		MIT1002_02750	0.74	+0.1
3,053,810	-		MIT1002_02750	0.89	+0.3
3,053,810	-		MIT1002_02750	0.89	-0.2
3,053,849	-				+1.4
3,053,859	+				-2.1
3,053,876	+				+1.1
3,053,909	-				-0.7
3,053,914	+				-0.2
3,053,925	+				-0.6
3,053,933	-				-0.8
3,053,985	+				-1.9
3,054,029	+				+0.5
3,054,043	-				-0.6
3,054,072	+				-0.5
3,054,087	-				+0.1
3,054,112	+		MIT1002_02751	0.12	+1.0
3,054,120	-		MIT1002_02751	0.13	+0.4
3,054,179	+		MIT1002_02751	0.21	-0.1
3,054,187	-		MIT1002_02751	0.22	-0.0
3,054,200	-		MIT1002_02751	0.23	-1.2
3,054,246	+		MIT1002_02751	0.29	-0.4
3,054,246	-		MIT1002_02751	0.29	+2.2
3,054,303	-		MIT1002_02751	0.36	+0.9
3,054,303	-		MIT1002_02751	0.36	-0.6
3,054,328	+		MIT1002_02751	0.39	+1.0
3,054,343	-		MIT1002_02751	0.41	+0.8
3,054,378	+		MIT1002_02751	0.46	+0.6
3,054,408	-		MIT1002_02751	0.49	+0.7
3,054,438	-		MIT1002_02751	0.53	+1.1
3,054,505	+		MIT1002_02751	0.62	+0.5
3,054,508	-		MIT1002_02751	0.62	+0.4
3,054,528	+		MIT1002_02751	0.65	-0.1
3,054,560	+		MIT1002_02751	0.69	+2.1
3,054,594	-		MIT1002_02751	0.73	+3.3
3,054,615	-		MIT1002_02751	0.75	-0.1
3,054,615	-		MIT1002_02751	0.75	+0.4
3,054,675	+		MIT1002_02751	0.83	-0.8
3,054,690	+		MIT1002_02751	0.85	-0.3
3,054,735	+				-1.3
3,054,764	+				-1.3
3,054,781	+				+0.3
3,054,783	-				+1.0
3,054,795	+				+1.0
3,054,847	-				-0.9
3,054,884	-				-1.2
3,054,895	+				+0.5
3,054,895	+				-0.8
3,054,895	+				+0.7
3,054,895	+				-0.5
3,054,903	-				-0.3
3,054,903	-				+0.6
3,054,903	-				-0.0
3,054,904	+				+1.5
3,054,937	-				+0.7
3,055,083	-				-2.3
3,055,083	-				-0.7
3,055,128	+				-0.9
3,055,279	+		MIT1002_02752	0.17	+0.4
3,055,340	+		MIT1002_02752	0.20	-0.1
3,055,365	+		MIT1002_02752	0.22	+2.1
3,055,406	-		MIT1002_02752	0.24	-1.4
3,055,417	-		MIT1002_02752	0.25	-2.7
3,055,427	+		MIT1002_02752	0.25	-2.0
3,055,427	+		MIT1002_02752	0.25	-1.6
3,055,428	-		MIT1002_02752	0.25	-0.2
3,055,460	-		MIT1002_02752	0.27	-0.8
3,055,671	-		MIT1002_02752	0.39	-0.1
3,055,672	+		MIT1002_02752	0.39	-2.1
3,055,679	+		MIT1002_02752	0.39	+0.0
3,055,680	-		MIT1002_02752	0.39	-0.5
3,055,680	-		MIT1002_02752	0.39	-0.6
3,055,687	-		MIT1002_02752	0.40	+0.6
3,055,791	+		MIT1002_02752	0.46	-0.8