Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02148

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
2,406,329	+		MIT1002_02146	0.70	-1.2
2,406,339	-		MIT1002_02146	0.71	+0.1
2,406,339	-		MIT1002_02146	0.71	+0.8
2,406,384	-		MIT1002_02146	0.77	+0.2
2,406,394	+		MIT1002_02146	0.78	-0.5
2,406,394	+		MIT1002_02146	0.78	-1.2
2,406,400	+		MIT1002_02146	0.79	-1.3
2,406,402	-		MIT1002_02146	0.79	-0.5
2,406,411	+		MIT1002_02146	0.80	+1.5
2,406,445	+		MIT1002_02146	0.84	+1.1
2,406,452	+		MIT1002_02146	0.85	+0.3
2,406,553	+				-0.2
2,406,598	+				+1.6
2,406,613	+				+0.0
2,406,615	+				-0.2
2,406,673	+				+0.6
2,406,678	+				-0.8
2,406,701	+				-1.4
2,406,706	+				-0.8
2,406,709	-				+0.0
2,406,762	+		MIT1002_02147	0.13	-0.8
2,406,762	+		MIT1002_02147	0.13	+1.6
2,406,769	+		MIT1002_02147	0.14	+0.5
2,406,770	-		MIT1002_02147	0.14	-2.5
2,406,770	-		MIT1002_02147	0.14	-0.4
2,406,770	-		MIT1002_02147	0.14	-0.3
2,406,793	+		MIT1002_02147	0.19	-0.3
2,406,904	+		MIT1002_02147	0.41	-0.2
2,406,910	-		MIT1002_02147	0.43	+1.8
2,406,912	-		MIT1002_02147	0.43	+1.9
2,406,961	+		MIT1002_02147	0.53	-0.9
2,406,961	+		MIT1002_02147	0.53	-0.5
2,406,966	-		MIT1002_02147	0.54	+0.0
2,406,968	-		MIT1002_02147	0.54	-0.2
2,406,969	-		MIT1002_02147	0.54	-0.1
2,406,969	-		MIT1002_02147	0.54	-0.7
2,407,054	-		MIT1002_02147	0.71	-0.0
2,407,071	+		MIT1002_02147	0.75	+0.0
2,407,081	+		MIT1002_02147	0.77	-0.9
2,407,089	-		MIT1002_02147	0.79	+2.5
2,407,089	-		MIT1002_02147	0.79	+0.9
2,407,089	-		MIT1002_02147	0.79	+1.4
2,407,126	-		MIT1002_02147	0.86	-0.1
2,407,131	-		MIT1002_02147	0.87	+0.5
2,407,306	-				+1.1
2,407,364	-		MIT1002_02148	0.14	-0.0
2,407,376	+		MIT1002_02148	0.15	+1.5
2,407,395	+		MIT1002_02148	0.18	+0.1
2,407,395	+		MIT1002_02148	0.18	-0.9
2,407,398	-		MIT1002_02148	0.18	+1.3
2,407,423	+		MIT1002_02148	0.22	+1.5
2,407,624	+		MIT1002_02148	0.51	+0.6
2,407,632	-		MIT1002_02148	0.52	-0.5
2,407,944	-				-1.0
2,407,952	-				+0.5
2,408,085	+				+1.0
2,408,628	-				+0.6