Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01994

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
2,229,209	+		MIT1002_01993	0.51	+0.4
2,229,216	+		MIT1002_01993	0.52	-1.4
2,229,223	-		MIT1002_01993	0.52	-0.3
2,229,295	+		MIT1002_01993	0.57	-1.2
2,229,423	+		MIT1002_01993	0.64	-1.9
2,229,480	+		MIT1002_01993	0.68	+0.2
2,229,489	+		MIT1002_01993	0.68	-1.0
2,229,516	+		MIT1002_01993	0.70	-0.4
2,229,524	+		MIT1002_01993	0.71	-0.7
2,229,524	-		MIT1002_01993	0.71	-0.5
2,229,524	-		MIT1002_01993	0.71	-0.9
2,229,526	+		MIT1002_01993	0.71	-3.0
2,229,534	-		MIT1002_01993	0.71	+0.8
2,229,569	+		MIT1002_01993	0.73	+1.1
2,229,591	+		MIT1002_01993	0.75	-1.7
2,229,591	-		MIT1002_01993	0.75	+0.7
2,229,697	+		MIT1002_01993	0.81	+0.2
2,229,697	+		MIT1002_01993	0.81	-0.5
2,229,697	+		MIT1002_01993	0.81	+0.0
2,229,705	-		MIT1002_01993	0.82	-0.2
2,229,707	+		MIT1002_01993	0.82	+1.6
2,229,707	+		MIT1002_01993	0.82	-0.0
2,229,721	+		MIT1002_01993	0.83	+0.5
2,229,780	-		MIT1002_01993	0.86	-0.0
2,229,788	-		MIT1002_01993	0.87	+1.0
2,229,789	+		MIT1002_01993	0.87	+2.2
2,229,830	-		MIT1002_01993	0.89	+0.8
2,229,907	+				+0.5
2,229,927	+				+0.0
2,229,990	-				+1.0
2,230,115	-				+0.2
2,230,151	-				-0.7
2,230,165	+				-0.4
2,230,173	-				+0.1
2,230,177	+				-1.4
2,230,184	-		MIT1002_01994	0.10	-0.7
2,230,237	+		MIT1002_01994	0.20	+0.5
2,230,272	-		MIT1002_01994	0.26	-1.8
2,230,337	+		MIT1002_01994	0.38	-0.5
2,230,368	-		MIT1002_01994	0.43	-1.9
2,230,394	-		MIT1002_01994	0.48	+0.2
2,230,430	-		MIT1002_01994	0.54	-3.2
2,230,452	-		MIT1002_01994	0.58	-0.2
2,230,505	-		MIT1002_01994	0.68	-0.8
2,230,562	+		MIT1002_01994	0.78	-1.3
2,230,592	+		MIT1002_01994	0.84	-0.4
2,230,720	-				+1.7
2,230,809	-				+0.1
2,230,823	+				-1.2
2,230,823	+				+0.3
2,230,831	-				+0.3
2,230,914	+				-0.0
2,230,969	-		MIT1002_01995	0.14	-1.3
2,230,969	-		MIT1002_01995	0.14	+0.5
2,230,988	-		MIT1002_01995	0.16	-0.2
2,231,091	-		MIT1002_01995	0.26	+1.6
2,231,136	+		MIT1002_01995	0.31	-0.2
2,231,144	-		MIT1002_01995	0.31	-0.5
2,231,180	-		MIT1002_01995	0.35	-0.6
2,231,202	+		MIT1002_01995	0.37	-1.5
2,231,210	-		MIT1002_01995	0.38	-3.3
2,231,330	-		MIT1002_01995	0.50	-0.7
2,231,356	+		MIT1002_01995	0.53	+0.1
2,231,356	+		MIT1002_01995	0.53	-0.5
2,231,356	+		MIT1002_01995	0.53	+1.2
2,231,364	-		MIT1002_01995	0.53	-0.3
2,231,364	-		MIT1002_01995	0.53	-0.5
2,231,374	-		MIT1002_01995	0.54	+2.3
2,231,375	-		MIT1002_01995	0.55	-0.9
2,231,423	+		MIT1002_01995	0.59	-2.3
2,231,447	+		MIT1002_01995	0.62	+0.2
2,231,462	-		MIT1002_01995	0.63	-0.0
2,231,462	-		MIT1002_01995	0.63	+0.5
2,231,558	-		MIT1002_01995	0.73	-0.5
2,231,568	-		MIT1002_01995	0.74	-1.8
2,231,606	+		MIT1002_01995	0.78	-0.8
2,231,624	-		MIT1002_01995	0.80	-0.5