Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01784

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
1,982,734	+		MIT1002_01783	0.44	+1.1
1,982,734	+		MIT1002_01783	0.44	-3.1
1,982,734	+		MIT1002_01783	0.44	+1.5
1,982,734	+		MIT1002_01783	0.44	+1.2
1,982,734	+		MIT1002_01783	0.44	+1.3
1,982,734	+		MIT1002_01783	0.44	-0.9
1,982,742	-		MIT1002_01783	0.45	+1.8
1,982,742	-		MIT1002_01783	0.45	-0.4
1,982,742	-		MIT1002_01783	0.45	+0.7
1,982,742	-		MIT1002_01783	0.45	+0.2
1,982,742	-		MIT1002_01783	0.45	-0.1
1,982,742	-		MIT1002_01783	0.45	+0.8
1,982,771	+		MIT1002_01783	0.48	+1.4
1,982,779	-		MIT1002_01783	0.48	+1.9
1,982,779	-		MIT1002_01783	0.48	+0.2
1,982,779	-		MIT1002_01783	0.48	+1.4
1,982,841	-		MIT1002_01783	0.54	+1.2
1,982,897	-		MIT1002_01783	0.58	+0.6
1,982,934	-		MIT1002_01783	0.62	-0.9
1,983,031	-		MIT1002_01783	0.70	+0.6
1,983,040	-		MIT1002_01783	0.71	+0.9
1,983,054	+		MIT1002_01783	0.72	+0.8
1,983,121	+		MIT1002_01783	0.78	+0.5
1,983,177	+		MIT1002_01783	0.83	-0.2
1,983,231	-		MIT1002_01783	0.87	+0.7
1,983,243	-		MIT1002_01783	0.88	+0.0
1,983,269	-				-0.9
1,983,307	+				-0.9
1,983,307	+				+0.1
1,983,315	-				-0.6
1,983,343	-				-0.6
1,983,462	+				-1.7
1,983,529	-				-0.4
1,983,562	+				+0.8
1,983,612	+				-0.4
1,983,679	+				+2.4
1,983,679	+				+0.0
1,983,679	+				-0.8
1,983,679	+				-0.8
1,983,687	-				-1.7
1,983,714	+				+0.8
1,983,754	+		MIT1002_01784	0.15	-0.1
1,983,943	-		MIT1002_01784	0.48	-0.1
1,984,011	+		MIT1002_01784	0.60	+0.3
1,984,055	+		MIT1002_01784	0.68	+1.0
1,984,088	+		MIT1002_01784	0.74	+2.3
1,984,133	+		MIT1002_01784	0.82	+1.4
1,984,133	+		MIT1002_01784	0.82	+0.6
1,984,133	+		MIT1002_01784	0.82	-1.4
1,984,228	+				-1.1
1,984,236	-				+0.6
1,984,291	-				+1.0
1,984,503	-				-1.4
1,984,529	-				+0.8
1,984,549	-				+0.4
1,984,567	+				-0.6
1,984,575	-		MIT1002_01785	0.10	+0.7
1,984,677	-		MIT1002_01785	0.16	+0.1
1,984,687	+		MIT1002_01785	0.17	+0.8
1,984,725	-		MIT1002_01785	0.19	+0.7
1,984,788	-		MIT1002_01785	0.23	+2.3
1,984,796	-		MIT1002_01785	0.24	+0.9
1,984,816	+		MIT1002_01785	0.25	+0.2
1,984,824	-		MIT1002_01785	0.26	-0.9
1,984,865	+		MIT1002_01785	0.28	-1.0
1,984,961	+		MIT1002_01785	0.34	+0.9
1,984,984	+		MIT1002_01785	0.36	+0.7
1,984,984	+		MIT1002_01785	0.36	-2.0
1,985,017	+		MIT1002_01785	0.38	+0.4
1,985,017	+		MIT1002_01785	0.38	-0.0
1,985,025	-		MIT1002_01785	0.38	+0.0
1,985,043	+		MIT1002_01785	0.39	-0.6
1,985,066	-		MIT1002_01785	0.41	+1.0
1,985,116	-		MIT1002_01785	0.44	+0.3
1,985,128	+		MIT1002_01785	0.45	+0.9
1,985,136	-		MIT1002_01785	0.45	+0.8
1,985,203	-		MIT1002_01785	0.49	-0.4
1,985,221	+		MIT1002_01785	0.51	+0.6
1,985,221	+		MIT1002_01785	0.51	+0.8