Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00992

Experiment: monoculture; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 3
1,098,064	+		MIT1002_00990	0.46	-0.9
1,098,111	-		MIT1002_00990	0.61	+0.1
1,098,168	+		MIT1002_00990	0.79	-0.5
1,098,273	+				-0.8
1,098,541	-				-0.7
1,098,597	-		MIT1002_00991	0.17	-0.1
1,098,597	-		MIT1002_00991	0.17	+0.8
1,098,603	+		MIT1002_00991	0.19	+0.5
1,098,623	+		MIT1002_00991	0.24	-0.0
1,098,658	-		MIT1002_00991	0.34	-1.5
1,098,697	+		MIT1002_00991	0.45	-0.0
1,098,703	-		MIT1002_00991	0.46	+0.7
1,098,766	+		MIT1002_00991	0.63	-0.2
1,099,008	-				+2.1
1,099,008	-				+1.3
1,099,049	+				-0.0
1,099,049	+				+0.4
1,099,167	+		MIT1002_00992	0.18	+1.6
1,099,176	-		MIT1002_00992	0.19	-1.2
1,099,190	+		MIT1002_00992	0.21	+0.6
1,099,318	+		MIT1002_00992	0.39	-0.1
1,099,353	-		MIT1002_00992	0.43	+0.0
1,099,382	-		MIT1002_00992	0.47	-0.4
1,099,383	-		MIT1002_00992	0.47	-0.9
1,099,471	+		MIT1002_00992	0.59	+0.6
1,099,479	-		MIT1002_00992	0.60	-2.5
1,099,515	+		MIT1002_00992	0.65	+0.7
1,099,515	+		MIT1002_00992	0.65	-0.3
1,099,515	+		MIT1002_00992	0.65	-1.0
1,099,515	+		MIT1002_00992	0.65	-0.5
1,099,515	+		MIT1002_00992	0.65	-1.0
1,099,523	-		MIT1002_00992	0.66	-0.2
1,099,523	-		MIT1002_00992	0.66	+0.4
1,099,541	+		MIT1002_00992	0.69	-0.4
1,099,737	-				-0.1
1,099,741	-				-0.2
1,099,741	-				-1.0
1,099,788	+				+0.0
1,099,788	+				-0.5
1,099,790	+				+0.8
1,099,790	-				+0.6
1,099,796	-				+0.3
1,099,801	-				-0.6
1,099,833	+				+0.1
1,099,875	+				-0.9
1,099,898	-				+0.7
1,099,923	+				+2.3
1,099,962	-				+0.7
1,100,040	+		MIT1002_00993	0.13	+1.0
1,100,040	+		MIT1002_00993	0.13	+0.5
1,100,040	+		MIT1002_00993	0.13	+0.3
1,100,190	-		MIT1002_00993	0.24	+0.1
1,100,192	+		MIT1002_00993	0.24	-0.4
1,100,288	-		MIT1002_00993	0.31	-1.2
1,100,398	+		MIT1002_00993	0.39	-0.2
1,100,406	-		MIT1002_00993	0.40	+0.3
1,100,462	+		MIT1002_00993	0.44	-0.4
1,100,470	-		MIT1002_00993	0.44	-0.1
1,100,492	+		MIT1002_00993	0.46	-0.2
1,100,518	+		MIT1002_00993	0.48	-0.4
1,100,649	+		MIT1002_00993	0.57	+0.4
1,100,686	+		MIT1002_00993	0.60	+0.2
1,100,767	+		MIT1002_00993	0.66	+0.0
1,100,774	+		MIT1002_00993	0.66	-0.5