Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03106

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
3,458,798	+		MIT1002_03104	0.50	+1.1
3,458,806	-		MIT1002_03104	0.51	+1.2
3,458,806	-		MIT1002_03104	0.51	-3.2
3,458,808	+		MIT1002_03104	0.51	+0.8
3,458,886	-		MIT1002_03104	0.60	-0.5
3,458,905	-		MIT1002_03104	0.63	+0.5
3,458,915	-		MIT1002_03104	0.64	+1.1
3,458,915	-		MIT1002_03104	0.64	+0.2
3,458,959	+		MIT1002_03104	0.69	+0.3
3,458,984	+		MIT1002_03104	0.72	-0.0
3,458,984	+		MIT1002_03104	0.72	-1.0
3,458,996	+		MIT1002_03104	0.74	+0.2
3,459,014	-		MIT1002_03104	0.76	+0.7
3,459,060	-		MIT1002_03104	0.82	+0.2
3,459,106	+		MIT1002_03104	0.87	+1.9
3,459,114	-		MIT1002_03104	0.88	+1.4
3,459,276	+		MIT1002_03105	0.19	-1.5
3,459,276	+		MIT1002_03105	0.19	+0.5
3,459,281	+		MIT1002_03105	0.20	+0.4
3,459,289	-		MIT1002_03105	0.22	+0.2
3,459,289	-		MIT1002_03105	0.22	+0.8
3,459,354	-		MIT1002_03105	0.37	-1.0
3,459,364	-		MIT1002_03105	0.40	+0.2
3,459,460	+		MIT1002_03105	0.62	-0.6
3,459,574	+		MIT1002_03105	0.89	+0.0
3,459,671	+				-0.3
3,459,774	+				+0.4
3,459,782	-				+0.5
3,459,817	+				-0.2
3,459,827	+		MIT1002_03106	0.10	-0.5
3,459,854	+		MIT1002_03106	0.13	+0.0
3,459,857	-		MIT1002_03106	0.13	-0.3
3,459,857	-		MIT1002_03106	0.13	-0.7
3,459,882	+		MIT1002_03106	0.15	-0.3
3,459,953	+		MIT1002_03106	0.22	+0.1
3,459,953	+		MIT1002_03106	0.22	+0.6
3,459,961	-		MIT1002_03106	0.23	+0.7
3,459,961	-		MIT1002_03106	0.23	-0.2
3,459,966	-		MIT1002_03106	0.24	+2.3
3,460,036	+		MIT1002_03106	0.30	+1.2
3,460,040	+		MIT1002_03106	0.31	+0.5
3,460,044	-		MIT1002_03106	0.31	-0.8
3,460,131	-		MIT1002_03106	0.40	+0.2
3,460,135	+		MIT1002_03106	0.40	-0.6
3,460,160	+		MIT1002_03106	0.42	+0.3
3,460,168	-		MIT1002_03106	0.43	+0.3
3,460,202	-		MIT1002_03106	0.46	+1.0
3,460,248	+		MIT1002_03106	0.51	-0.4
3,460,264	-		MIT1002_03106	0.52	+0.1
3,460,275	-		MIT1002_03106	0.53	+0.3
3,460,281	-		MIT1002_03106	0.54	-0.3
3,460,420	+		MIT1002_03106	0.67	+0.4
3,460,428	-		MIT1002_03106	0.68	+1.0
3,460,457	-		MIT1002_03106	0.71	+0.7
3,460,493	-		MIT1002_03106	0.74	-1.3
3,460,502	-		MIT1002_03106	0.75	+0.9
3,460,630	+		MIT1002_03106	0.88	+0.3
3,460,713	+				+1.3
3,460,751	+				+1.5
3,460,845	-				-0.5
3,460,845	-				+0.4