Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02636

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
2,928,828	+				-4.8
2,928,828	+				-4.0
2,928,846	-				-4.8
2,928,864	-		MIT1002_02635	0.11	-4.2
2,928,874	-		MIT1002_02635	0.12	-2.0
2,928,879	-		MIT1002_02635	0.12	-1.6
2,928,923	+		MIT1002_02635	0.16	-4.2
2,928,961	-		MIT1002_02635	0.20	-4.8
2,928,965	+		MIT1002_02635	0.20	-4.0
2,928,975	-		MIT1002_02635	0.21	-4.1
2,929,009	-		MIT1002_02635	0.24	-1.9
2,929,010	-		MIT1002_02635	0.24	-2.5
2,929,046	+		MIT1002_02635	0.28	-4.8
2,929,050	+		MIT1002_02635	0.28	-4.2
2,929,152	+		MIT1002_02635	0.38	-3.7
2,929,213	-		MIT1002_02635	0.43	-1.7
2,929,331	+		MIT1002_02635	0.54	-6.0
2,929,443	+		MIT1002_02635	0.65	-2.7
2,929,443	+		MIT1002_02635	0.65	-6.9
2,929,443	+		MIT1002_02635	0.65	-1.7
2,929,443	+		MIT1002_02635	0.65	-4.6
2,929,443	+		MIT1002_02635	0.65	-3.1
2,929,443	+		MIT1002_02635	0.65	-1.7
2,929,443	+		MIT1002_02635	0.65	-4.0
2,929,443	+		MIT1002_02635	0.65	-1.1
2,929,443	+		MIT1002_02635	0.65	-5.6
2,929,443	+		MIT1002_02635	0.65	-2.6
2,929,443	+		MIT1002_02635	0.65	-4.0
2,929,443	+		MIT1002_02635	0.65	-4.6
2,929,443	+		MIT1002_02635	0.65	-5.9
2,929,445	+		MIT1002_02635	0.65	-1.6
2,929,451	-		MIT1002_02635	0.66	-2.6
2,929,451	-		MIT1002_02635	0.66	-4.6
2,929,451	-		MIT1002_02635	0.66	-4.2
2,929,451	-		MIT1002_02635	0.66	-2.5
2,929,451	-		MIT1002_02635	0.66	-1.6
2,929,451	-		MIT1002_02635	0.66	-3.6
2,929,451	-		MIT1002_02635	0.66	-4.1
2,929,453	-		MIT1002_02635	0.66	-3.4
2,929,453	-		MIT1002_02635	0.66	-4.0
2,929,458	+		MIT1002_02635	0.66	-4.2
2,929,458	+		MIT1002_02635	0.66	-2.1
2,929,458	+		MIT1002_02635	0.66	-4.1
2,929,460	-		MIT1002_02635	0.66	-2.1
2,929,465	-		MIT1002_02635	0.67	-5.0
2,929,466	-		MIT1002_02635	0.67	-5.8
2,929,487	+		MIT1002_02635	0.69	-2.9
2,929,514	-		MIT1002_02635	0.71	-3.9
2,929,674	+		MIT1002_02635	0.86	-3.1
2,929,680	+		MIT1002_02635	0.87	-4.2
2,929,728	-				-5.0
2,929,745	+				-4.3
2,929,771	-				-4.7
2,929,782	+				-7.7
2,929,793	+				-4.4
2,929,801	+				-2.6
2,929,822	-				-1.9
2,929,840	-				-5.5
2,929,894	+		MIT1002_02636	0.12	-4.0
2,929,916	+		MIT1002_02636	0.15	-4.9
2,930,039	-		MIT1002_02636	0.35	-6.6
2,930,083	-		MIT1002_02636	0.42	-6.0
2,930,103	-		MIT1002_02636	0.45	-1.4
2,930,103	-		MIT1002_02636	0.45	-4.6
2,930,125	+		MIT1002_02636	0.49	-1.1
2,930,144	+		MIT1002_02636	0.52	-2.5
2,930,151	-		MIT1002_02636	0.53	-3.1
2,930,196	-		MIT1002_02636	0.60	-5.0
2,930,209	+		MIT1002_02636	0.62	-5.2
2,930,214	+		MIT1002_02636	0.63	-5.2
2,930,270	+		MIT1002_02636	0.72	-0.9
2,930,288	+		MIT1002_02636	0.74	-0.6
2,930,288	+		MIT1002_02636	0.74	-5.3
2,930,520	+				-3.5
2,930,537	-		MIT1002_02637	0.12	-4.7
2,930,550	+		MIT1002_02637	0.14	-3.9
2,930,645	+		MIT1002_02637	0.27	-4.7
2,930,645	+		MIT1002_02637	0.27	-3.2
2,930,730	+		MIT1002_02637	0.38	-4.8
2,930,730	+		MIT1002_02637	0.38	-4.3
2,930,738	-		MIT1002_02637	0.39	-0.6
2,930,806	+		MIT1002_02637	0.49	-4.3
2,930,820	+		MIT1002_02637	0.50	-2.3
2,930,820	+		MIT1002_02637	0.50	-0.6
2,930,828	-		MIT1002_02637	0.51	-3.4
2,930,828	-		MIT1002_02637	0.51	-2.3
2,930,910	-		MIT1002_02637	0.63	-2.3
2,930,956	+		MIT1002_02637	0.69	-2.9
2,930,981	+		MIT1002_02637	0.72	-4.0
2,930,995	+		MIT1002_02637	0.74	-4.1
2,931,114	+				-4.4
2,931,150	+				-3.4
2,931,265	+		MIT1002_02638	0.12	-4.1
2,931,419	-		MIT1002_02638	0.31	-3.0