Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02533

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
2,827,909	+				+0.3
2,828,001	+				-0.4
2,828,040	-				-0.2
2,828,047	+				+0.6
2,828,124	-				-0.7
2,828,140	+				-0.4
2,828,150	+				-1.2
2,828,172	+				+0.1
2,828,185	-				-1.8
2,828,229	+		MIT1002_02533	0.13	-0.1
2,828,279	+		MIT1002_02533	0.19	-0.2
2,828,287	-		MIT1002_02533	0.20	-1.2
2,828,287	-		MIT1002_02533	0.20	+0.4
2,828,287	-		MIT1002_02533	0.20	-1.2
2,828,287	-		MIT1002_02533	0.20	+1.0
2,828,287	-		MIT1002_02533	0.20	+0.0
2,828,365	+		MIT1002_02533	0.31	-0.5
2,828,365	+		MIT1002_02533	0.31	-0.2
2,828,474	-		MIT1002_02533	0.45	-0.4
2,828,515	+		MIT1002_02533	0.50	-2.2
2,828,523	-		MIT1002_02533	0.51	-0.3
2,828,541	+		MIT1002_02533	0.54	-1.3
2,828,541	+		MIT1002_02533	0.54	-0.7
2,828,558	-		MIT1002_02533	0.56	+0.4
2,828,569	-		MIT1002_02533	0.58	+0.0
2,828,595	-		MIT1002_02533	0.61	-0.1
2,828,595	-		MIT1002_02533	0.61	-0.5
2,828,596	-		MIT1002_02533	0.61	+0.3
2,828,596	-		MIT1002_02533	0.61	-1.2
2,828,639	-		MIT1002_02533	0.67	-0.1
2,828,639	-		MIT1002_02533	0.67	+0.8
2,828,721	-		MIT1002_02533	0.78	+0.1
2,828,753	-		MIT1002_02533	0.82	-0.0
2,828,840	-				-1.3
2,828,891	+				+0.3
2,828,950	+				+0.1
2,828,950	+				-0.6
2,828,958	-				+1.0
2,829,030	-				-2.1
2,829,030	-				-0.8
2,829,083	+				-0.2
2,829,083	+				+0.4
2,829,091	-				-0.5
2,829,091	-				-0.2
2,829,101	-				+0.8
2,829,121	-				+0.6
2,829,194	+		MIT1002_02534	0.19	-0.9
2,829,202	-		MIT1002_02534	0.20	-0.3
2,829,219	+		MIT1002_02534	0.22	+0.6
2,829,219	-		MIT1002_02534	0.22	+0.4
2,829,234	+		MIT1002_02534	0.24	-0.4
2,829,249	-		MIT1002_02534	0.27	+0.2
2,829,342	-		MIT1002_02534	0.40	+0.4
2,829,448	+		MIT1002_02534	0.56	-0.2
2,829,509	-		MIT1002_02534	0.64	-0.0
2,829,558	-		MIT1002_02534	0.71	+0.6
2,829,577	-		MIT1002_02534	0.74	+0.7
2,829,588	+		MIT1002_02534	0.76	+0.3
2,829,596	-		MIT1002_02534	0.77	+1.3
2,829,644	-		MIT1002_02534	0.84	-0.4
2,829,644	-		MIT1002_02534	0.84	+0.3
2,829,810	-				-0.4
2,829,882	+		MIT1002_02535	0.29	+0.1
2,829,889	+		MIT1002_02535	0.31	-0.0