Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02155

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
2,411,051	+				+0.4
2,411,059	-				-1.9
2,411,114	-				+0.8
2,411,193	-				+8.1
2,411,236	+		MIT1002_02154	0.15	+8.6
2,411,242	+		MIT1002_02154	0.16	+7.5
2,411,400	-		MIT1002_02154	0.40	+8.2
2,411,746	-				+7.9
2,411,809	-				+2.0
2,411,858	+				+7.2
2,411,866	+				+4.9
2,411,866	+				+4.9
2,411,866	+				+5.4
2,411,874	-				+2.9
2,411,874	-				-0.3
2,411,874	-				+0.6
2,412,087	+		MIT1002_02155	0.17	+0.4
2,412,087	+		MIT1002_02155	0.17	-0.6
2,412,095	-		MIT1002_02155	0.18	-0.5
2,412,095	-		MIT1002_02155	0.18	-1.2
2,412,095	-		MIT1002_02155	0.18	+0.8
2,412,097	+		MIT1002_02155	0.18	+0.4
2,412,099	+		MIT1002_02155	0.18	-0.1
2,412,109	-		MIT1002_02155	0.20	+0.6
2,412,140	+		MIT1002_02155	0.24	+0.3
2,412,147	+		MIT1002_02155	0.25	+0.5
2,412,223	+		MIT1002_02155	0.35	-1.0
2,412,223	+		MIT1002_02155	0.35	-0.4
2,412,227	-		MIT1002_02155	0.36	-0.7
2,412,307	+		MIT1002_02155	0.47	+0.6
2,412,310	-		MIT1002_02155	0.47	-0.8
2,412,379	-		MIT1002_02155	0.57	-1.0
2,412,387	-		MIT1002_02155	0.58	+0.4
2,412,396	+		MIT1002_02155	0.59	+0.3
2,412,402	+		MIT1002_02155	0.60	+0.1
2,412,403	-		MIT1002_02155	0.60	+0.5
2,412,403	-		MIT1002_02155	0.60	-0.3
2,412,423	-		MIT1002_02155	0.63	+0.6
2,412,525	-		MIT1002_02155	0.77	-0.5
2,412,538	+		MIT1002_02155	0.79	-0.5
2,412,606	+		MIT1002_02155	0.88	+0.9
2,412,729	+				-2.7
2,412,731	+				-1.9
2,412,739	-				+0.3
2,412,739	-				-1.7
2,412,745	+				+0.0
2,412,753	-				+0.5
2,412,753	-				+0.1
2,412,976	-				+0.6
2,412,995	-				-0.4
2,413,044	+				-1.7
2,413,083	+		MIT1002_02156	0.12	-1.9
2,413,083	+		MIT1002_02156	0.12	-0.5
2,413,086	-		MIT1002_02156	0.12	+0.8
2,413,091	-		MIT1002_02156	0.13	-0.5
2,413,091	-		MIT1002_02156	0.13	+0.2
2,413,114	+		MIT1002_02156	0.14	-0.5
2,413,114	+		MIT1002_02156	0.14	-0.9
2,413,151	+		MIT1002_02156	0.17	-0.4
2,413,159	-		MIT1002_02156	0.17	+0.1
2,413,174	+		MIT1002_02156	0.19	-0.5
2,413,211	+		MIT1002_02156	0.21	-0.1
2,413,266	+		MIT1002_02156	0.25	-0.7
2,413,266	+		MIT1002_02156	0.25	+0.1
2,413,266	+		MIT1002_02156	0.25	-0.8
2,413,274	-		MIT1002_02156	0.25	-0.2
2,413,282	-		MIT1002_02156	0.26	+0.9
2,413,327	+		MIT1002_02156	0.29	-0.1
2,413,422	+		MIT1002_02156	0.35	-0.7
2,413,446	+		MIT1002_02156	0.37	+0.7
2,413,463	+		MIT1002_02156	0.38	-0.4
2,413,474	-		MIT1002_02156	0.39	+1.9
2,413,482	-		MIT1002_02156	0.40	+0.5
2,413,482	-		MIT1002_02156	0.40	+1.0
2,413,482	-		MIT1002_02156	0.40	+0.4
2,413,529	+		MIT1002_02156	0.43	-0.2
2,413,529	+		MIT1002_02156	0.43	-0.6
2,413,598	+		MIT1002_02156	0.47	-0.2
2,413,658	-		MIT1002_02156	0.52	-0.7