Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02110

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
2,369,233	-		MIT1002_02109	0.43	+0.3
2,369,248	-		MIT1002_02109	0.44	+0.8
2,369,248	-		MIT1002_02109	0.44	-0.5
2,369,318	-		MIT1002_02109	0.51	+0.6
2,369,333	-		MIT1002_02109	0.53	+0.5
2,369,365	+		MIT1002_02109	0.56	+0.3
2,369,389	+		MIT1002_02109	0.58	-1.6
2,369,440	-		MIT1002_02109	0.63	-0.4
2,369,464	-		MIT1002_02109	0.65	+0.6
2,369,464	-		MIT1002_02109	0.65	+0.0
2,369,534	+		MIT1002_02109	0.72	-2.2
2,369,534	+		MIT1002_02109	0.72	-0.4
2,369,534	+		MIT1002_02109	0.72	+0.0
2,369,542	-		MIT1002_02109	0.73	+0.5
2,369,600	+		MIT1002_02109	0.79	+0.7
2,369,615	+		MIT1002_02109	0.80	+0.2
2,369,661	-		MIT1002_02109	0.85	+0.8
2,369,782	+				-1.2
2,369,797	+				-1.3
2,369,894	-				-1.2
2,370,058	-				+0.9
2,370,078	-				+0.4
2,370,079	-				+2.3
2,370,206	+				+1.4
2,370,214	-				-0.5
2,370,214	-				+0.5
2,370,214	-				+0.3
2,370,214	-				+0.2
2,370,295	-		MIT1002_02110	0.14	+0.8
2,370,313	+		MIT1002_02110	0.16	-0.5
2,370,436	-		MIT1002_02110	0.28	+0.3
2,370,528	-		MIT1002_02110	0.38	-0.6
2,370,541	-		MIT1002_02110	0.39	+0.2
2,370,541	-		MIT1002_02110	0.39	+0.2
2,370,541	-		MIT1002_02110	0.39	+0.7
2,370,591	+		MIT1002_02110	0.44	+0.5
2,370,593	+		MIT1002_02110	0.44	-0.5
2,370,593	+		MIT1002_02110	0.44	+0.0
2,370,629	+		MIT1002_02110	0.48	+2.1
2,370,641	+		MIT1002_02110	0.49	+2.5
2,370,658	+		MIT1002_02110	0.50	+0.3
2,370,714	+		MIT1002_02110	0.56	-1.5
2,370,721	+		MIT1002_02110	0.57	+0.3
2,370,721	+		MIT1002_02110	0.57	+0.9
2,370,996	-		MIT1002_02110	0.84	+0.6
2,371,021	+		MIT1002_02110	0.87	-0.3
2,371,101	+				+0.4
2,371,286	+				+0.4
2,371,314	-				-0.7
2,371,344	+				+0.4
2,371,344	+				+0.5
2,371,353	-				-0.2
2,371,387	+				+0.0
2,371,441	-		MIT1002_02111	0.10	+0.7
2,371,465	-		MIT1002_02111	0.13	-0.1
2,371,480	+		MIT1002_02111	0.15	-1.1
2,371,488	-		MIT1002_02111	0.15	-0.6
2,371,530	+		MIT1002_02111	0.20	+0.2
2,371,573	-		MIT1002_02111	0.24	+1.3
2,371,575	+		MIT1002_02111	0.25	+0.9
2,371,628	+		MIT1002_02111	0.30	+0.1
2,371,688	+		MIT1002_02111	0.37	-0.4
2,371,739	+		MIT1002_02111	0.42	+0.4
2,371,747	-		MIT1002_02111	0.43	+0.2
2,371,777	-		MIT1002_02111	0.46	+0.4
2,371,835	+		MIT1002_02111	0.52	-0.3
2,371,835	+		MIT1002_02111	0.52	-0.3
2,371,839	-		MIT1002_02111	0.53	-0.1
2,371,891	-		MIT1002_02111	0.58	+0.3
2,371,921	-		MIT1002_02111	0.62	+0.9
2,371,935	+		MIT1002_02111	0.63	+1.6
2,371,957	-		MIT1002_02111	0.65	-0.7
2,372,050	+		MIT1002_02111	0.75	-0.1
2,372,050	+		MIT1002_02111	0.75	-1.7
2,372,050	+		MIT1002_02111	0.75	+0.6
2,372,050	+		MIT1002_02111	0.75	+1.7
2,372,058	-		MIT1002_02111	0.76	+1.2
2,372,058	-		MIT1002_02111	0.76	-1.0
2,372,071	+		MIT1002_02111	0.78	-0.6
2,372,079	-		MIT1002_02111	0.79	-0.1
2,372,079	-		MIT1002_02111	0.79	-0.9
2,372,079	-		MIT1002_02111	0.79	+0.3
2,372,154	+		MIT1002_02111	0.87	-0.0