Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01658

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
1,830,349	+				-0.5
1,830,385	-				-0.5
1,830,558	+		MIT1002_01657	0.16	-0.3
1,830,589	-		MIT1002_01657	0.20	-0.9
1,830,672	-		MIT1002_01657	0.29	-0.4
1,830,681	+		MIT1002_01657	0.30	-0.6
1,830,681	+		MIT1002_01657	0.30	-0.4
1,830,689	-		MIT1002_01657	0.31	-0.7
1,830,709	+		MIT1002_01657	0.34	-1.0
1,830,755	+		MIT1002_01657	0.39	-3.0
1,830,943	+		MIT1002_01657	0.61	-0.9
1,831,039	+		MIT1002_01657	0.73	-1.6
1,831,063	+		MIT1002_01657	0.76	-0.9
1,831,115	-		MIT1002_01657	0.82	-2.2
1,831,163	-		MIT1002_01657	0.87	-1.9
1,831,247	-				-0.6
1,831,247	-				+0.1
1,831,247	-				+1.4
1,831,261	-				-0.4
1,831,263	+				+0.6
1,831,263	+				-0.3
1,831,263	-				+1.0
1,831,394	-		MIT1002_01658	0.10	-0.2
1,831,394	-		MIT1002_01658	0.10	+0.6
1,831,403	-		MIT1002_01658	0.12	+0.1
1,831,420	-		MIT1002_01658	0.14	-1.1
1,831,490	+		MIT1002_01658	0.22	+0.5
1,831,490	+		MIT1002_01658	0.22	+1.7
1,831,498	-		MIT1002_01658	0.23	-0.6
1,831,502	+		MIT1002_01658	0.24	-0.6
1,831,703	-		MIT1002_01658	0.48	+0.1
1,831,744	-		MIT1002_01658	0.53	-0.5
1,831,788	+		MIT1002_01658	0.59	-1.1
1,831,833	-		MIT1002_01658	0.64	-1.1
1,831,868	+		MIT1002_01658	0.69	-0.7
1,831,868	+		MIT1002_01658	0.69	+0.5
1,831,876	-		MIT1002_01658	0.69	-0.4
1,831,876	-		MIT1002_01658	0.69	+0.4
1,831,876	-		MIT1002_01658	0.69	-0.7
1,831,876	-		MIT1002_01658	0.69	+0.1
1,831,954	+		MIT1002_01658	0.79	-1.1
1,832,036	-		MIT1002_01658	0.89	+0.1
1,832,107	-				-0.1
1,832,146	+				+1.9
1,832,173	+				-0.9
1,832,174	-				+0.5
1,832,265	-				+0.4
1,832,271	-				+0.6
1,832,297	+				-0.2
1,832,299	-				+0.0
1,832,299	-				-0.9
1,832,299	-				-0.6
1,832,299	-				-0.5
1,832,308	+				-1.1
1,832,316	-				+0.0
1,832,341	+				+0.1
1,832,341	+				+0.3
1,832,372	+				+0.4
1,832,447	+		MIT1002_01659	0.12	-0.3
1,832,479	+		MIT1002_01659	0.14	-0.1
1,832,479	+		MIT1002_01659	0.14	+0.2
1,832,479	+		MIT1002_01659	0.14	+0.4
1,832,487	-		MIT1002_01659	0.15	+0.0
1,832,487	-		MIT1002_01659	0.15	+0.3
1,832,487	-		MIT1002_01659	0.15	+0.6
1,832,487	-		MIT1002_01659	0.15	-0.6
1,832,496	-		MIT1002_01659	0.15	+0.8
1,832,503	+		MIT1002_01659	0.16	+0.1
1,832,503	+		MIT1002_01659	0.16	-0.2
1,832,503	+		MIT1002_01659	0.16	+0.4
1,832,503	+		MIT1002_01659	0.16	+0.3
1,832,503	+		MIT1002_01659	0.16	-0.1
1,832,503	+		MIT1002_01659	0.16	-1.9
1,832,503	+		MIT1002_01659	0.16	-0.2
1,832,503	+		MIT1002_01659	0.16	-0.3
1,832,511	-		MIT1002_01659	0.16	+0.9
1,832,511	-		MIT1002_01659	0.16	-0.1
1,832,511	-		MIT1002_01659	0.16	-0.1
1,832,511	-		MIT1002_01659	0.16	+0.9
1,832,511	-		MIT1002_01659	0.16	-1.7
1,832,511	-		MIT1002_01659	0.16	+1.0
1,832,511	-		MIT1002_01659	0.16	-0.1
1,832,511	-		MIT1002_01659	0.16	-0.8
1,832,511	-		MIT1002_01659	0.16	+0.5
1,832,547	+		MIT1002_01659	0.19	-1.2
1,832,577	+		MIT1002_01659	0.21	-1.0
1,832,585	-		MIT1002_01659	0.22	-0.5
1,832,585	-		MIT1002_01659	0.22	-0.0
1,832,633	+		MIT1002_01659	0.26	+0.7
1,832,689	+		MIT1002_01659	0.30	-0.3
1,832,708	+		MIT1002_01659	0.31	-2.0
1,832,835	+		MIT1002_01659	0.41	+1.8
1,832,837	+		MIT1002_01659	0.41	+0.7
1,832,845	-		MIT1002_01659	0.42	-0.3
1,832,845	-		MIT1002_01659	0.42	+0.3
1,832,855	-		MIT1002_01659	0.42	-0.4
1,832,855	-		MIT1002_01659	0.42	+0.5
1,832,856	+		MIT1002_01659	0.42	+0.9
1,832,928	+		MIT1002_01659	0.48	+0.1
1,832,960	-		MIT1002_01659	0.50	+0.1
1,833,013	-		MIT1002_01659	0.54	-0.3