Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01415

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
1,557,599	+				-0.0
1,557,687	-		MIT1002_01413	0.14	-1.7
1,557,713	+		MIT1002_01413	0.28	-1.0
1,557,734	-		MIT1002_01413	0.39	+0.6
1,557,773	+		MIT1002_01413	0.61	+0.3
1,557,797	+		MIT1002_01413	0.74	+1.4
1,557,797	+		MIT1002_01413	0.74	-1.5
1,557,968	-		MIT1002_01414	0.12	-0.2
1,557,973	-		MIT1002_01414	0.13	-0.3
1,558,006	-		MIT1002_01414	0.18	+0.8
1,558,086	+		MIT1002_01414	0.30	-0.0
1,558,148	-		MIT1002_01414	0.39	+2.0
1,558,153	+		MIT1002_01414	0.40	-0.2
1,558,251	+		MIT1002_01414	0.55	-0.2
1,558,253	+		MIT1002_01414	0.55	+1.1
1,558,254	-		MIT1002_01414	0.55	-0.9
1,558,254	-		MIT1002_01414	0.55	+0.1
1,558,259	-		MIT1002_01414	0.56	-0.4
1,558,259	-		MIT1002_01414	0.56	-0.8
1,558,376	+		MIT1002_01414	0.74	-1.7
1,558,390	-		MIT1002_01414	0.76	+0.6
1,558,393	+		MIT1002_01414	0.77	+0.5
1,558,571	+				+0.1
1,558,656	-		MIT1002_01415	0.13	+1.1
1,558,693	+		MIT1002_01415	0.19	+1.1
1,558,701	-		MIT1002_01415	0.20	-0.3
1,558,709	-		MIT1002_01415	0.21	-1.9
1,558,727	-		MIT1002_01415	0.23	-2.3
1,558,780	+		MIT1002_01415	0.31	-0.5
1,558,896	+		MIT1002_01415	0.48	-1.0
1,558,914	-		MIT1002_01415	0.50	-2.1
1,558,953	-		MIT1002_01415	0.56	-1.7
1,558,962	+		MIT1002_01415	0.57	-0.5
1,558,979	+		MIT1002_01415	0.60	+0.2
1,558,982	+		MIT1002_01415	0.60	-0.6
1,558,990	+		MIT1002_01415	0.61	-0.7
1,559,194	+				-2.6
1,559,264	-				+0.4
1,559,339	+				+1.0
1,559,349	-				-0.0
1,559,359	-				+0.5
1,559,391	+				+1.0
1,559,391	+				+0.4
1,559,391	+				-1.0
1,559,419	-				+0.5
1,559,551	-		MIT1002_01416	0.11	-0.8
1,559,599	-		MIT1002_01416	0.13	+0.7
1,559,615	+		MIT1002_01416	0.14	-0.5
1,559,623	+		MIT1002_01416	0.14	+0.1
1,559,804	+		MIT1002_01416	0.21	-1.6
1,559,804	+		MIT1002_01416	0.21	-0.3
1,559,812	-		MIT1002_01416	0.22	-0.7
1,559,812	-		MIT1002_01416	0.22	+0.3
1,559,927	+		MIT1002_01416	0.26	-1.2
1,559,935	-		MIT1002_01416	0.27	-1.5
1,560,029	+		MIT1002_01416	0.30	+0.2
1,560,098	+		MIT1002_01416	0.33	+0.5
1,560,098	+		MIT1002_01416	0.33	-0.8
1,560,098	+		MIT1002_01416	0.33	-0.1
1,560,106	-		MIT1002_01416	0.33	+0.4
1,560,106	-		MIT1002_01416	0.33	-0.1
1,560,148	-		MIT1002_01416	0.35	+0.2
1,560,207	-		MIT1002_01416	0.37	-0.6