Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01132

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
1,243,928	+		MIT1002_01129	0.16	-3.2
1,243,928	+		MIT1002_01129	0.16	-2.0
1,243,944	-		MIT1002_01129	0.24	-3.7
1,243,953	-		MIT1002_01129	0.29	-1.2
1,243,954	-		MIT1002_01129	0.30	-3.2
1,244,078	+				-0.5
1,244,122	-				+0.0
1,244,123	+				-1.5
1,244,174	+				+2.6
1,244,230	+				-0.2
1,244,236	+				+0.6
1,244,236	+				+0.3
1,244,236	+				-0.6
1,244,244	-				+0.1
1,244,244	-				-0.7
1,244,279	+				+0.0
1,244,280	+				+0.5
1,244,288	-				+0.9
1,244,307	+				+2.3
1,244,315	-				+1.7
1,244,315	-				+1.4
1,244,315	-				+0.4
1,244,472	-				+0.5
1,244,787	+				-2.7
1,244,814	+		MIT1002_01131	0.40	-0.3
1,244,891	+				-0.2
1,244,925	-		MIT1002_01132	0.16	-1.6
1,245,082	-				+0.3
1,245,150	-				+0.4
1,245,207	+				+0.8
1,245,215	+				-0.3
1,245,215	+				-0.0
1,245,215	+				-1.3
1,245,215	+				+0.0
1,245,215	-				-0.4
1,245,217	+				+0.4
1,245,223	-				+0.0
1,245,223	-				-1.7
1,245,223	-				-0.7
1,245,223	-				-0.9
1,245,233	-				-1.2
1,245,251	+				-0.1
1,245,251	+				-2.2
1,245,251	+				+0.4
1,245,251	+				-0.2
1,245,251	+				-0.1
1,245,251	+				+0.1
1,245,251	+				+0.0
1,245,251	+				+0.2
1,245,251	+				+0.1
1,245,251	+				-1.5
1,245,259	-				+0.8
1,245,259	-				-1.3
1,245,259	-				-0.6
1,245,259	-				+0.4
1,245,259	-				+0.5
1,245,259	-				-2.1
1,245,259	-				-0.1
1,245,259	-				-1.7
1,245,259	-				+0.4
1,245,259	-				-0.4
1,245,259	-				+1.0
1,245,259	-				+0.2
1,245,259	-				+1.0
1,245,259	-				+0.1
1,245,259	-				+0.0
1,245,372	+				+0.1
1,245,389	-				+0.9
1,245,394	+				-0.2
1,245,500	+		MIT1002_01133	0.73	+0.5
1,245,549	+				-0.7
1,245,590	-				+0.1
1,245,596	-				-0.8
1,245,665	+				+0.2
1,245,673	-				+0.5
1,245,673	-				+0.1
1,245,673	-				+0.7
1,245,673	-				+0.6
1,245,761	-				+0.0
1,245,791	+				+0.0
1,245,791	-				-3.5
1,245,805	+		MIT1002_01134	0.14	-0.2
1,245,812	+		MIT1002_01134	0.16	+1.8
1,245,870	-		MIT1002_01134	0.35	+0.3