Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04144

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
8,704	+		MIT1002_04143	0.71	-0.6
8,758	-		MIT1002_04143	0.77	-1.4
8,786	-		MIT1002_04143	0.79	+0.4
8,791	+		MIT1002_04143	0.80	+0.2
8,799	+		MIT1002_04143	0.81	-1.8
8,799	+		MIT1002_04143	0.81	+0.3
8,799	+		MIT1002_04143	0.81	+0.6
8,799	+		MIT1002_04143	0.81	-0.5
8,807	-		MIT1002_04143	0.82	+0.6
8,807	-		MIT1002_04143	0.82	+1.1
8,807	-		MIT1002_04143	0.82	+0.3
8,807	-		MIT1002_04143	0.82	+1.9
8,807	-		MIT1002_04143	0.82	+0.4
8,807	-		MIT1002_04143	0.82	-0.5
8,814	+		MIT1002_04143	0.82	+1.0
8,857	+		MIT1002_04143	0.87	-1.7
8,865	-		MIT1002_04143	0.88	+0.1
8,865	-		MIT1002_04143	0.88	+0.1
8,865	-		MIT1002_04143	0.88	+0.1
8,894	+				+1.6
8,920	-				+0.4
8,920	-				+0.9
8,976	-				+0.3
9,037	-				+1.8
9,037	-				+0.5
9,114	+				+1.1
9,180	-				+0.3
9,221	+				-0.1
9,262	+				+0.3
9,262	+				+1.5
9,270	-				-0.1
9,275	-				+0.2
9,289	-				-1.5
9,311	+				-0.2
9,311	+				-0.1
9,311	+				-0.5
9,311	+				-0.4
9,311	+				-0.2
9,311	+				+0.5
9,311	+				+0.0
9,311	+				+0.3
9,311	+				-1.2
9,311	+				-0.2
9,319	-				+0.2
9,319	-				-1.0
9,319	-				+0.6
9,319	-				+0.2
9,319	-				+0.1
9,319	-				+0.5
9,319	-				+0.1
9,319	-				-0.9
9,319	-				+3.0
9,324	-				-1.8
9,340	-				+0.8
9,365	+				-0.4
9,365	+				-0.1
9,367	+				+0.8
9,368	-				+0.4
9,373	-				+0.2
9,373	-				-0.3
9,375	-				+1.1
9,408	-				-0.5
9,509	-				+1.2
9,511	+				+1.0
9,511	+				+0.8
9,627	-				+0.4
9,642	-				+1.2
9,689	+				-1.1
9,729	+		MIT1002_04144	0.20	-0.1
9,790	+		MIT1002_04144	0.38	+0.2
9,790	+		MIT1002_04144	0.38	+0.1
9,790	+		MIT1002_04144	0.38	-0.6
9,790	+		MIT1002_04144	0.38	+0.5
9,790	+		MIT1002_04144	0.38	-0.8
9,790	+		MIT1002_04144	0.38	+0.1
9,790	+		MIT1002_04144	0.38	+1.5
9,790	+		MIT1002_04144	0.38	-1.5
9,790	+		MIT1002_04144	0.38	-0.2
9,790	+		MIT1002_04144	0.38	+2.2
9,790	+		MIT1002_04144	0.38	+0.4
9,790	+		MIT1002_04144	0.38	-1.7
9,790	+		MIT1002_04144	0.38	-0.4
9,790	+		MIT1002_04144	0.38	+0.6
9,790	+		MIT1002_04144	0.38	-1.1
9,790	+		MIT1002_04144	0.38	+0.1
9,790	+		MIT1002_04144	0.38	-3.1
9,790	+		MIT1002_04144	0.38	+0.4
9,790	+		MIT1002_04144	0.38	+0.5
9,790	+		MIT1002_04144	0.38	-0.3
9,790	+		MIT1002_04144	0.38	-0.8
9,790	+		MIT1002_04144	0.38	+0.6
9,790	+		MIT1002_04144	0.38	-1.6
9,790	+		MIT1002_04144	0.38	+0.1
9,790	+		MIT1002_04144	0.38	-0.4
9,798	-		MIT1002_04144	0.41	+0.1
9,798	-		MIT1002_04144	0.41	-2.7
9,798	-		MIT1002_04144	0.41	+0.2
9,798	-		MIT1002_04144	0.41	-0.9
9,798	-		MIT1002_04144	0.41	-0.5
9,798	-		MIT1002_04144	0.41	-0.7
9,798	-		MIT1002_04144	0.41	-1.2
9,798	-		MIT1002_04144	0.41	-0.0
9,798	-		MIT1002_04144	0.41	+2.8
9,798	-		MIT1002_04144	0.41	-0.3
9,798	-		MIT1002_04144	0.41	-0.2
9,798	-		MIT1002_04144	0.41	+1.3
9,798	-		MIT1002_04144	0.41	-0.3
9,798	-		MIT1002_04144	0.41	+0.6
9,798	-		MIT1002_04144	0.41	+0.9
9,798	-		MIT1002_04144	0.41	-0.0
9,798	-		MIT1002_04144	0.41	+1.2
9,798	-		MIT1002_04144	0.41	-0.9
9,798	-		MIT1002_04144	0.41	-1.9
9,808	-		MIT1002_04144	0.44	+0.2
9,883	-		MIT1002_04144	0.66	-0.2
9,911	-		MIT1002_04144	0.75	+0.1
9,957	+		MIT1002_04144	0.89	-1.1
9,967	+				+1.7
10,076	+				-0.1
10,084	-				-0.7
10,247	-				+2.7
10,266	-				-0.2
10,281	+				+0.1
10,308	+		MIT1002_04145	0.15	-0.8
10,376	-		MIT1002_04145	0.80	-3.3
10,385	+		MIT1002_04145	0.89	-1.6
10,388	-				+0.4
10,388	-				+1.2
10,476	+				-0.8
10,538	+				-0.6
10,538	+				-1.5
10,538	+				+0.6
10,546	-				+0.8
10,546	-				-2.0
10,546	-				+1.9
10,546	-				+0.1
10,581	+				-0.4
10,589	+				+0.3
10,605	+				-0.0
10,659	+		MIT1002_04146	0.14	-1.7
10,667	-		MIT1002_04146	0.15	-0.4
10,762	-		MIT1002_04146	0.30	-0.3
10,789	+		MIT1002_04146	0.34	+0.2
10,797	-		MIT1002_04146	0.35	+1.2
10,797	-		MIT1002_04146	0.35	-1.4
10,797	-		MIT1002_04146	0.35	+0.8
10,797	-		MIT1002_04146	0.35	-0.9
10,797	-		MIT1002_04146	0.35	+0.9
10,882	+		MIT1002_04146	0.49	-1.7