Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03984

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
4,469,838	+				-0.0
4,469,943	+		MIT1002_03983	0.17	-0.0
4,470,090	-		MIT1002_03983	0.31	-1.3
4,470,204	-		MIT1002_03983	0.42	-1.0
4,470,225	-		MIT1002_03983	0.44	-0.6
4,470,242	+		MIT1002_03983	0.46	-0.3
4,470,315	+		MIT1002_03983	0.53	-4.4
4,470,323	+		MIT1002_03983	0.53	-0.3
4,470,323	-		MIT1002_03983	0.53	-1.7
4,470,416	+		MIT1002_03983	0.62	-0.0
4,470,637	-		MIT1002_03983	0.83	-2.3
4,470,720	-				-2.3
4,470,736	-				-1.6
4,470,754	-				-0.6
4,470,911	+				-0.3
4,470,919	-				-2.5
4,470,931	-		MIT1002_03984	0.10	-1.2
4,470,951	+		MIT1002_03984	0.12	-3.6
4,470,971	-		MIT1002_03984	0.13	-0.0
4,471,003	+		MIT1002_03984	0.16	-0.0
4,471,024	-		MIT1002_03984	0.18	-0.0
4,471,108	+		MIT1002_03984	0.25	-1.2
4,471,116	-		MIT1002_03984	0.26	-0.6
4,471,133	-		MIT1002_03984	0.27	-0.8
4,471,148	-		MIT1002_03984	0.28	-0.3
4,471,305	+		MIT1002_03984	0.41	-2.5
4,471,449	-		MIT1002_03984	0.53	-0.6
4,471,479	+		MIT1002_03984	0.56	-0.8
4,471,497	-		MIT1002_03984	0.57	-0.3
4,471,617	-		MIT1002_03984	0.67	-0.6
4,471,666	-		MIT1002_03984	0.71	-0.0
4,471,780	+		MIT1002_03984	0.81	-0.3
4,471,977	+				-0.9
4,471,996	+				+0.8
4,472,005	-				-0.3
4,472,065	+		MIT1002_03985	0.12	-0.6
4,472,073	-		MIT1002_03985	0.14	-0.3
4,472,129	+		MIT1002_03985	0.26	-0.0
4,472,262	-		MIT1002_03985	0.53	-0.3
4,472,272	+		MIT1002_03985	0.55	-1.8
4,472,285	-		MIT1002_03985	0.58	-3.3
4,472,330	+		MIT1002_03985	0.68	-2.4
4,472,335	+		MIT1002_03985	0.69	-1.2
4,472,377	+		MIT1002_03985	0.77	-2.8
4,472,385	-		MIT1002_03985	0.79	-0.0
4,472,468	+				+0.4
4,472,476	-				+0.3
4,472,509	-				-0.9
4,472,540	-				-1.5
4,472,635	+		MIT1002_03986	0.20	+0.6
4,472,642	+		MIT1002_03986	0.21	+1.2
4,472,661	+		MIT1002_03986	0.24	+0.9
4,472,727	+		MIT1002_03986	0.32	-0.0
4,472,727	+		MIT1002_03986	0.32	-0.8
4,472,727	+		MIT1002_03986	0.32	-0.2
4,472,752	+		MIT1002_03986	0.36	-0.1
4,472,775	+		MIT1002_03986	0.39	+0.8
4,472,798	+		MIT1002_03986	0.42	+0.3
4,472,832	+		MIT1002_03986	0.46	-0.6
4,472,832	+		MIT1002_03986	0.46	-0.4
4,472,877	+		MIT1002_03986	0.52	+1.2
4,472,933	-		MIT1002_03986	0.60	-0.7
4,472,954	+		MIT1002_03986	0.62	-1.2