Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03979

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
4,466,649	-		MIT1002_03978	0.19	-1.9
4,466,768	-		MIT1002_03978	0.28	-0.3
4,466,859	+		MIT1002_03978	0.36	-3.1
4,466,867	-		MIT1002_03978	0.37	-0.0
4,466,886	+		MIT1002_03978	0.38	-2.0
4,466,970	+		MIT1002_03978	0.45	-1.5
4,467,042	-		MIT1002_03978	0.51	-1.2
4,467,198	-		MIT1002_03978	0.63	-0.8
4,467,198	-		MIT1002_03978	0.63	-2.5
4,467,236	-		MIT1002_03978	0.67	-1.2
4,467,242	+		MIT1002_03978	0.67	-2.7
4,467,288	+		MIT1002_03978	0.71	-2.5
4,467,358	+		MIT1002_03978	0.77	-4.5
4,467,394	+		MIT1002_03978	0.79	-1.5
4,467,394	+		MIT1002_03978	0.79	-0.8
4,467,575	+				-0.0
4,467,687	+				-0.6
4,467,855	-		MIT1002_03979	0.48	-1.3
4,467,867	-		MIT1002_03979	0.51	-2.5
4,467,905	+		MIT1002_03979	0.59	-1.3
4,468,084	-				-3.3
4,468,185	-		MIT1002_03980	0.15	-1.5
4,468,185	-		MIT1002_03980	0.15	-1.6
4,468,317	-		MIT1002_03980	0.37	-1.5
4,468,415	-		MIT1002_03980	0.52	-1.0
4,468,622	+		MIT1002_03980	0.85	-1.0
4,468,643	+		MIT1002_03980	0.89	-0.8
4,468,643	+		MIT1002_03980	0.89	-2.3
4,468,651	-		MIT1002_03980	0.90	-0.6
4,468,651	-		MIT1002_03980	0.90	-1.8
4,468,707	-				-0.6
4,468,839	+		MIT1002_03981	0.30	-0.6
4,468,847	-		MIT1002_03981	0.32	-0.6
4,468,847	-		MIT1002_03981	0.32	-3.4
4,468,954	+		MIT1002_03981	0.57	-1.2