Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03797

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
4,244,621	-				+1.1
4,244,685	+				+0.4
4,244,723	-				-0.0
4,244,767	+				+0.4
4,244,767	+				+1.0
4,244,785	-				-0.4
4,244,900	+		MIT1002_03797	0.10	-1.0
4,244,919	+		MIT1002_03797	0.12	-1.0
4,244,987	+		MIT1002_03797	0.21	-1.2
4,244,999	+		MIT1002_03797	0.22	+0.5
4,245,000	+		MIT1002_03797	0.22	-1.1
4,245,189	+		MIT1002_03797	0.45	-0.2
4,245,199	+		MIT1002_03797	0.46	+0.8
4,245,199	+		MIT1002_03797	0.46	-1.3
4,245,207	-		MIT1002_03797	0.47	+0.8
4,245,274	-		MIT1002_03797	0.55	+0.4
4,245,305	-		MIT1002_03797	0.59	+1.0
4,245,389	-		MIT1002_03797	0.69	-1.2
4,245,389	-		MIT1002_03797	0.69	+0.0
4,245,389	-		MIT1002_03797	0.69	-0.5
4,245,396	+		MIT1002_03797	0.70	-1.0
4,245,415	+		MIT1002_03797	0.72	-0.6
4,245,530	-		MIT1002_03797	0.86	-0.2
4,245,594	-				-1.8
4,245,611	-				+0.1
4,245,674	-				-1.6
4,245,693	-				+0.1
4,245,697	+				-2.5
4,245,755	+				-0.0
4,245,765	+				-0.0
4,245,765	+				+0.1
4,245,765	+				-0.2
4,245,765	+				+0.5
4,245,765	+				-0.3
4,245,765	+				-0.3
4,245,765	+				+1.3
4,245,765	+				-0.2
4,245,765	+				+0.3
4,245,773	-				+0.5
4,245,773	-				+0.6
4,245,773	-				+0.1
4,245,773	-				+0.8
4,245,773	-				-1.2
4,245,773	-				+0.4
4,245,773	-				+0.2
4,245,773	-				+0.1
4,245,773	-				-0.4
4,245,773	-				-0.4
4,245,773	-				-1.9
4,245,773	-				+0.9
4,245,821	+				+0.1
4,245,882	-		MIT1002_03798	0.15	-0.4
4,245,882	-		MIT1002_03798	0.15	-0.7
4,245,886	+		MIT1002_03798	0.16	+0.2
4,245,886	+		MIT1002_03798	0.16	-0.8
4,245,886	+		MIT1002_03798	0.16	-1.1
4,245,929	-		MIT1002_03798	0.26	+0.9
4,245,941	+		MIT1002_03798	0.28	+1.3
4,245,949	-		MIT1002_03798	0.30	+0.0
4,245,949	-		MIT1002_03798	0.30	+0.5
4,245,989	-		MIT1002_03798	0.38	-0.6
4,246,040	-		MIT1002_03798	0.49	+0.4
4,246,064	+		MIT1002_03798	0.55	-0.0
4,246,085	+		MIT1002_03798	0.59	-0.2
4,246,178	-		MIT1002_03798	0.79	-0.8
4,246,192	+		MIT1002_03798	0.82	-0.3
4,246,192	+		MIT1002_03798	0.82	-0.9
4,246,200	-		MIT1002_03798	0.84	+1.5
4,246,211	+		MIT1002_03798	0.86	-1.0
4,246,241	-				-1.0
4,246,268	-				-0.6
4,246,277	-				+0.9
4,246,292	+				+0.2
4,246,300	-				-0.2
4,246,342	+				-0.5
4,246,383	+		MIT1002_03799	0.15	-1.8
4,246,383	+		MIT1002_03799	0.15	-0.2
4,246,391	-		MIT1002_03799	0.17	-1.0
4,246,431	+		MIT1002_03799	0.26	-1.2
4,246,439	-		MIT1002_03799	0.27	-2.1
4,246,441	+		MIT1002_03799	0.28	-0.2
4,246,473	-		MIT1002_03799	0.34	-1.7
4,246,587	-		MIT1002_03799	0.58	-0.5