Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03681

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
4,113,038	-				-1.2
4,113,068	+				-1.4
4,113,103	-		MIT1002_03680	0.10	+0.6
4,113,167	+		MIT1002_03680	0.17	-0.2
4,113,211	-		MIT1002_03680	0.21	-1.0
4,113,261	+		MIT1002_03680	0.26	+0.3
4,113,265	-		MIT1002_03680	0.27	-2.5
4,113,452	-		MIT1002_03680	0.46	+0.2
4,113,501	-		MIT1002_03680	0.51	+0.1
4,113,544	+		MIT1002_03680	0.55	-0.3
4,113,552	-		MIT1002_03680	0.56	-0.1
4,113,552	-		MIT1002_03680	0.56	-0.1
4,113,573	+		MIT1002_03680	0.58	-0.4
4,113,590	+		MIT1002_03680	0.60	-0.8
4,113,593	-		MIT1002_03680	0.60	-1.0
4,113,598	-		MIT1002_03680	0.61	+0.0
4,113,598	-		MIT1002_03680	0.61	-0.8
4,113,598	-		MIT1002_03680	0.61	-2.9
4,113,598	-		MIT1002_03680	0.61	-1.2
4,113,672	-		MIT1002_03680	0.68	-0.9
4,113,746	-		MIT1002_03680	0.76	+0.7
4,113,783	+		MIT1002_03680	0.80	-1.3
4,113,783	+		MIT1002_03680	0.80	-0.6
4,113,792	-		MIT1002_03680	0.80	-0.3
4,113,793	+		MIT1002_03680	0.81	+1.7
4,113,801	-		MIT1002_03680	0.81	-0.1
4,113,801	-		MIT1002_03680	0.81	-1.5
4,113,801	-		MIT1002_03680	0.81	+0.0
4,113,811	-		MIT1002_03680	0.82	-1.4
4,113,811	-		MIT1002_03680	0.82	+3.4
4,113,811	-		MIT1002_03680	0.82	-1.2
4,113,864	-		MIT1002_03680	0.88	-0.9
4,113,926	-				-0.7
4,113,989	+				+0.1
4,114,049	+				+0.1
4,114,240	-		MIT1002_03681	0.36	-0.6
4,114,272	+		MIT1002_03681	0.41	-2.0
4,114,275	+		MIT1002_03681	0.41	-0.3
4,114,280	-		MIT1002_03681	0.42	-0.8
4,114,282	+		MIT1002_03681	0.42	-0.6
4,114,284	+		MIT1002_03681	0.43	+0.2
4,114,365	+		MIT1002_03681	0.54	-0.7
4,114,365	+		MIT1002_03681	0.54	-0.1
4,114,373	-		MIT1002_03681	0.55	-1.0
4,114,373	-		MIT1002_03681	0.55	-1.4
4,114,373	-		MIT1002_03681	0.55	+0.8
4,114,373	-		MIT1002_03681	0.55	+1.5
4,114,531	-		MIT1002_03681	0.77	-1.6
4,114,535	-		MIT1002_03681	0.78	-1.5
4,114,540	+		MIT1002_03681	0.78	-2.3
4,114,540	+		MIT1002_03681	0.78	-0.8
4,114,548	-		MIT1002_03681	0.80	-0.5
4,114,548	-		MIT1002_03681	0.80	-0.6
4,114,708	+				+0.7