Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03485

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
3,890,674	-				-1.2
3,890,757	+				-0.4
3,890,817	+				-0.1
3,890,923	+		MIT1002_03484	0.24	-2.6
3,890,936	-		MIT1002_03484	0.26	-1.1
3,891,275	-		MIT1002_03484	0.82	-0.1
3,891,285	-		MIT1002_03484	0.83	-2.1
3,891,495	-		MIT1002_03485	0.17	-1.2
3,891,566	+		MIT1002_03485	0.28	-1.2
3,891,602	+		MIT1002_03485	0.33	-0.4
3,891,636	+		MIT1002_03485	0.39	-0.1
3,891,937	-		MIT1002_03485	0.86	-1.5
3,891,950	+		MIT1002_03485	0.88	-1.5
3,891,966	-				-1.6
3,892,120	+		MIT1002_03486	0.11	+0.9
3,892,128	-		MIT1002_03486	0.12	-2.1
3,892,128	-		MIT1002_03486	0.12	+0.9
3,892,250	-		MIT1002_03486	0.28	-0.4
3,892,476	+		MIT1002_03486	0.58	+0.8
3,892,476	+		MIT1002_03486	0.58	-1.6
3,892,494	-		MIT1002_03486	0.60	-0.6
3,892,505	+		MIT1002_03486	0.62	+0.4
3,892,610	+		MIT1002_03486	0.75	-1.9
3,892,752	+				-0.9
3,892,752	+				-2.1
3,892,758	+				-1.2
3,892,760	-				-1.6
3,892,838	+				+0.7