Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03481

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
3,887,150	+				-0.0
3,887,158	-				-0.6
3,887,158	-				+0.1
3,887,158	-				-0.0
3,887,234	-				-2.2
3,887,352	+				+1.1
3,887,408	+				-0.0
3,887,603	-		MIT1002_03479	0.54	-0.9
3,887,710	-				-0.1
3,887,752	+		MIT1002_03480	0.13	-0.2
3,887,782	+		MIT1002_03480	0.23	-0.1
3,887,785	-		MIT1002_03480	0.24	+0.0
3,887,790	-		MIT1002_03480	0.25	+0.6
3,887,821	+		MIT1002_03480	0.36	-1.8
3,887,864	+		MIT1002_03480	0.50	-0.4
3,887,907	-		MIT1002_03480	0.64	+1.0
3,888,013	-				-0.7
3,888,046	-				-1.3
3,888,058	-				+0.5
3,888,073	+				+0.6
3,888,073	+				-2.0
3,888,081	-				-0.2
3,888,117	-				-1.1
3,888,117	-				-0.5
3,888,117	-				+0.2
3,888,117	-				+0.6
3,888,205	+		MIT1002_03481	0.37	-2.2
3,888,205	-		MIT1002_03481	0.37	-1.9
3,888,213	-		MIT1002_03481	0.40	-0.2
3,888,213	-		MIT1002_03481	0.40	-0.9
3,888,213	-		MIT1002_03481	0.40	-2.9
3,888,310	-		MIT1002_03481	0.82	-2.3