Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03251

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
3,620,848	-		MIT1002_03250	0.69	-0.0
3,620,848	-		MIT1002_03250	0.69	-1.0
3,620,848	-		MIT1002_03250	0.69	-0.3
3,620,848	-		MIT1002_03250	0.69	-0.4
3,620,848	-		MIT1002_03250	0.69	+1.3
3,620,918	+		MIT1002_03250	0.75	+0.4
3,620,918	+		MIT1002_03250	0.75	+0.5
3,620,921	-		MIT1002_03250	0.76	+0.6
3,620,938	+		MIT1002_03250	0.77	-0.5
3,620,938	+		MIT1002_03250	0.77	-0.2
3,620,938	+		MIT1002_03250	0.77	+1.3
3,620,938	+		MIT1002_03250	0.77	+0.9
3,621,021	-		MIT1002_03250	0.85	-0.2
3,621,023	+		MIT1002_03250	0.85	-0.4
3,621,023	+		MIT1002_03250	0.85	-0.0
3,621,028	+		MIT1002_03250	0.86	-0.7
3,621,031	-		MIT1002_03250	0.86	+1.1
3,621,131	+				-0.1
3,621,190	-				+1.2
3,621,248	+				-0.1
3,621,256	-				+3.0
3,621,285	+				+0.0
3,621,285	+				-0.2
3,621,285	-				+1.2
3,621,293	-				-0.4
3,621,301	+				+0.7
3,621,310	-				-0.5
3,621,314	+				-1.7
3,621,341	-				-0.5
3,621,440	-				-0.1
3,621,576	+				+0.7
3,621,643	-				+0.2
3,621,655	-				+0.5
3,621,724	-				-1.4
3,621,785	+				-2.6
3,621,793	-				+0.7
3,621,818	+				+0.2
3,621,834	+				+0.5
3,621,834	+				+1.5
3,621,834	+				-0.3
3,621,834	+				-1.4
3,621,835	+				+1.9
3,621,840	+				+1.6
3,621,842	-				+0.1
3,621,845	+				+0.9
3,621,848	-				-0.4
3,621,858	-				-0.6
3,621,861	+				-0.0
3,621,867	+				-1.1
3,621,869	-				+0.0
3,621,912	-				+0.7
3,621,920	-				+1.9
3,621,924	-				+0.1
3,621,961	-		MIT1002_03251	0.10	-1.4
3,622,123	+		MIT1002_03251	0.24	-0.8
3,622,123	+		MIT1002_03251	0.24	+0.2
3,622,123	+		MIT1002_03251	0.24	-1.3
3,622,130	-		MIT1002_03251	0.25	+0.2
3,622,211	-		MIT1002_03251	0.32	+0.1
3,622,371	-		MIT1002_03251	0.45	+0.3
3,622,383	-		MIT1002_03251	0.47	-0.0
3,622,424	-		MIT1002_03251	0.50	+1.0
3,622,424	-		MIT1002_03251	0.50	-0.7
3,622,523	+		MIT1002_03251	0.59	-0.3
3,622,531	-		MIT1002_03251	0.59	+0.7
3,622,548	+		MIT1002_03251	0.61	-0.1
3,622,637	-		MIT1002_03251	0.68	+0.4
3,622,646	+		MIT1002_03251	0.69	+0.2
3,622,646	+		MIT1002_03251	0.69	-0.7
3,622,654	-		MIT1002_03251	0.70	-0.5
3,622,678	-		MIT1002_03251	0.72	-0.8
3,622,688	-		MIT1002_03251	0.73	-0.4
3,622,716	-		MIT1002_03251	0.75	+0.7
3,622,729	+		MIT1002_03251	0.76	-0.2
3,622,756	+		MIT1002_03251	0.79	-1.4
3,622,786	-		MIT1002_03251	0.81	-0.0
3,622,811	+		MIT1002_03251	0.83	-0.1
3,622,844	+		MIT1002_03251	0.86	-1.1
3,622,844	+		MIT1002_03251	0.86	+0.4
3,622,889	+				-0.8
3,622,889	+				-1.8
3,622,986	-				-0.1
3,622,986	-				-0.7
3,623,011	+				+1.7
3,623,020	+				-1.7
3,623,038	+				-0.5
3,623,080	+				-0.2
3,623,128	+				-1.3
3,623,233	+				+1.7
3,623,238	+				+1.2
3,623,246	-				+1.8
3,623,366	+				-0.1
3,623,420	+		MIT1002_03252	0.10	-0.6
3,623,439	+		MIT1002_03252	0.11	-0.5
3,623,447	-		MIT1002_03252	0.12	-0.1
3,623,447	-		MIT1002_03252	0.12	+1.4
3,623,447	-		MIT1002_03252	0.12	+0.3
3,623,447	-		MIT1002_03252	0.12	-0.7
3,623,447	-		MIT1002_03252	0.12	+1.7
3,623,447	-		MIT1002_03252	0.12	+0.2
3,623,594	+		MIT1002_03252	0.18	+1.2
3,623,602	-		MIT1002_03252	0.19	-2.0
3,623,673	-		MIT1002_03252	0.22	-0.0
3,623,673	-		MIT1002_03252	0.22	-2.3
3,623,675	+		MIT1002_03252	0.22	+0.2
3,623,675	+		MIT1002_03252	0.22	+0.4
3,623,675	+		MIT1002_03252	0.22	-2.1
3,623,683	-		MIT1002_03252	0.22	+0.2
3,623,683	-		MIT1002_03252	0.22	-0.2
3,623,683	-		MIT1002_03252	0.22	-0.1
3,623,719	+		MIT1002_03252	0.24	-0.5
3,623,743	+		MIT1002_03252	0.25	+0.0
3,623,753	+		MIT1002_03252	0.26	-0.2
3,623,753	+		MIT1002_03252	0.26	-0.6
3,623,790	-		MIT1002_03252	0.27	-0.1
3,623,795	-		MIT1002_03252	0.28	+0.4
3,623,808	-		MIT1002_03252	0.28	+0.5
3,623,969	+		MIT1002_03252	0.36	-0.3
3,623,984	-		MIT1002_03252	0.36	+0.4