Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03211

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
3,581,098	-		MIT1002_03210	0.67	-0.1
3,581,111	+		MIT1002_03210	0.67	+0.1
3,581,137	+		MIT1002_03210	0.68	-0.8
3,581,179	-		MIT1002_03210	0.69	+0.5
3,581,227	-		MIT1002_03210	0.71	-0.2
3,581,232	-		MIT1002_03210	0.71	+0.8
3,581,232	-		MIT1002_03210	0.71	-0.5
3,581,249	-		MIT1002_03210	0.72	+1.9
3,581,278	-		MIT1002_03210	0.73	+0.6
3,581,336	+		MIT1002_03210	0.75	+0.9
3,581,470	-		MIT1002_03210	0.79	+0.0
3,581,484	+		MIT1002_03210	0.80	-1.1
3,581,489	+		MIT1002_03210	0.80	-1.3
3,581,497	-		MIT1002_03210	0.80	-0.5
3,581,497	-		MIT1002_03210	0.80	-0.3
3,581,505	+		MIT1002_03210	0.81	+0.5
3,581,603	-		MIT1002_03210	0.84	+0.6
3,581,617	-		MIT1002_03210	0.84	-0.5
3,581,747	-		MIT1002_03210	0.89	+0.7
3,581,863	-				-0.5
3,581,866	+				-0.6
3,581,918	-				-0.4
3,581,957	-				+0.1
3,581,962	-				+0.3
3,582,069	+				+0.6
3,582,069	+				+0.2
3,582,069	+				-0.5
3,582,077	-				-0.5
3,582,078	+				+1.6
3,582,141	+				-0.5
3,582,190	-				+0.3
3,582,284	+		MIT1002_03211	0.16	-0.1
3,582,294	-		MIT1002_03211	0.17	+0.9
3,582,324	+		MIT1002_03211	0.19	-1.2
3,582,332	-		MIT1002_03211	0.20	-0.4
3,582,332	-		MIT1002_03211	0.20	+1.1
3,582,332	-		MIT1002_03211	0.20	+0.3
3,582,354	-		MIT1002_03211	0.22	+0.8
3,582,394	+		MIT1002_03211	0.25	-0.1
3,582,397	-		MIT1002_03211	0.26	+0.3
3,582,408	+		MIT1002_03211	0.26	+0.4
3,582,424	-		MIT1002_03211	0.28	-1.3
3,582,437	+		MIT1002_03211	0.29	-0.6
3,582,474	+		MIT1002_03211	0.32	-0.2
3,582,482	-		MIT1002_03211	0.33	+0.5
3,582,491	-		MIT1002_03211	0.33	-0.0
3,582,493	+		MIT1002_03211	0.34	-0.1
3,582,501	-		MIT1002_03211	0.34	-1.7
3,582,506	-		MIT1002_03211	0.35	+0.1
3,582,581	-		MIT1002_03211	0.41	+0.1
3,582,707	+		MIT1002_03211	0.52	+0.4
3,582,738	+		MIT1002_03211	0.54	-0.0
3,582,806	-		MIT1002_03211	0.60	+0.7
3,582,817	-		MIT1002_03211	0.61	+1.3
3,582,851	-		MIT1002_03211	0.64	-0.1
3,582,869	+		MIT1002_03211	0.65	+0.2
3,582,877	-		MIT1002_03211	0.66	+0.4
3,582,886	+		MIT1002_03211	0.67	+0.1
3,582,894	-		MIT1002_03211	0.67	+1.2
3,582,894	-		MIT1002_03211	0.67	-0.5
3,582,947	-		MIT1002_03211	0.72	-0.8
3,582,961	-		MIT1002_03211	0.73	+0.2
3,582,961	-		MIT1002_03211	0.73	+1.4
3,582,978	+		MIT1002_03211	0.74	+0.4
3,582,978	+		MIT1002_03211	0.74	-2.6
3,583,135	-		MIT1002_03211	0.88	+1.2
3,583,140	+		MIT1002_03211	0.88	-0.1
3,583,235	-				-4.2
3,583,237	+				+0.9
3,583,400	+				-1.2
3,583,424	+				-0.2
3,583,426	+				-1.3
3,583,592	+		MIT1002_03212	0.20	+1.5
3,583,625	-		MIT1002_03212	0.22	+0.9
3,583,630	-		MIT1002_03212	0.22	+1.0
3,583,664	+		MIT1002_03212	0.24	+0.5
3,583,699	+		MIT1002_03212	0.27	+0.8
3,583,767	+		MIT1002_03212	0.31	-0.9
3,583,775	-		MIT1002_03212	0.31	-1.4
3,583,775	-		MIT1002_03212	0.31	-0.1
3,583,775	-		MIT1002_03212	0.31	-0.1
3,583,780	-		MIT1002_03212	0.32	+0.9
3,583,811	+		MIT1002_03212	0.34	-0.3
3,583,869	+		MIT1002_03212	0.37	-0.1
3,583,875	+		MIT1002_03212	0.38	-1.1
3,583,889	-		MIT1002_03212	0.39	-0.0
3,583,970	+		MIT1002_03212	0.44	+0.1
3,583,976	-		MIT1002_03212	0.44	+0.7
3,584,001	-		MIT1002_03212	0.46	-2.2
3,584,004	-		MIT1002_03212	0.46	-0.2
3,584,028	+		MIT1002_03212	0.47	+0.3
3,584,032	+		MIT1002_03212	0.48	-0.6
3,584,040	-		MIT1002_03212	0.48	-0.2
3,584,069	+		MIT1002_03212	0.50	+1.1
3,584,076	+		MIT1002_03212	0.51	-1.0
3,584,076	+		MIT1002_03212	0.51	+0.8
3,584,076	-		MIT1002_03212	0.51	+2.4
3,584,076	-		MIT1002_03212	0.51	+0.6
3,584,084	-		MIT1002_03212	0.51	-0.5
3,584,084	-		MIT1002_03212	0.51	+0.5
3,584,201	+		MIT1002_03212	0.59	+0.0
3,584,241	+		MIT1002_03212	0.61	-0.5
3,584,249	-		MIT1002_03212	0.62	-0.1
3,584,249	-		MIT1002_03212	0.62	+0.5
3,584,274	+		MIT1002_03212	0.63	-0.0