Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02484

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
2,770,187	-				+2.1
2,770,270	+				+0.2
2,770,294	+				+1.0
2,770,303	-				+0.4
2,770,373	-		MIT1002_02483	0.16	-0.2
2,770,397	-		MIT1002_02483	0.19	-1.9
2,770,583	-		MIT1002_02483	0.40	+2.8
2,770,583	-		MIT1002_02483	0.40	+0.1
2,770,605	+		MIT1002_02483	0.42	-1.2
2,770,613	-		MIT1002_02483	0.43	+0.2
2,770,639	+		MIT1002_02483	0.46	-0.1
2,770,669	+		MIT1002_02483	0.49	+0.4
2,770,694	+		MIT1002_02483	0.52	+0.3
2,770,742	-		MIT1002_02483	0.58	-0.4
2,770,756	+		MIT1002_02483	0.59	-0.0
2,770,771	-		MIT1002_02483	0.61	+0.1
2,770,838	+		MIT1002_02483	0.69	-1.8
2,770,972	+		MIT1002_02483	0.84	+0.6
2,770,977	+		MIT1002_02483	0.85	+0.2
2,771,024	-		MIT1002_02483	0.90	+0.6
2,771,064	+				+1.5
2,771,086	-				-0.7
2,771,163	+				-2.0
2,771,166	-				+0.0
2,771,193	+				-1.9
2,771,201	-				-1.9
2,771,226	-				-0.8
2,771,251	-				-2.2
2,771,251	-				-0.6
2,771,277	-				-0.6
2,771,287	-				-0.5
2,771,306	-				+0.1
2,771,317	+				-0.4
2,771,324	+		MIT1002_02484	0.10	+2.5
2,771,327	-		MIT1002_02484	0.11	-1.0
2,771,338	+		MIT1002_02484	0.11	-0.7
2,771,348	+		MIT1002_02484	0.12	+1.4
2,771,365	+		MIT1002_02484	0.13	-0.9
2,771,371	+		MIT1002_02484	0.14	-0.6
2,771,371	+		MIT1002_02484	0.14	+0.4
2,771,371	+		MIT1002_02484	0.14	-0.7
2,771,371	+		MIT1002_02484	0.14	+0.5
2,771,378	-		MIT1002_02484	0.14	-1.4
2,771,379	-		MIT1002_02484	0.14	+0.4
2,771,379	-		MIT1002_02484	0.14	+0.1
2,771,379	-		MIT1002_02484	0.14	-1.0
2,771,498	+		MIT1002_02484	0.23	+0.7
2,771,505	+		MIT1002_02484	0.24	-1.3
2,771,505	+		MIT1002_02484	0.24	-1.0
2,771,508	-		MIT1002_02484	0.24	-0.3
2,771,513	-		MIT1002_02484	0.24	+0.2
2,771,513	-		MIT1002_02484	0.24	-0.5
2,771,513	-		MIT1002_02484	0.24	-0.1
2,771,515	+		MIT1002_02484	0.25	+0.9
2,771,523	-		MIT1002_02484	0.25	+0.7
2,771,523	-		MIT1002_02484	0.25	-0.4
2,771,530	-		MIT1002_02484	0.26	-0.5
2,771,566	+		MIT1002_02484	0.28	+0.3
2,771,605	+		MIT1002_02484	0.31	-1.2
2,771,613	-		MIT1002_02484	0.32	-1.6
2,771,616	+		MIT1002_02484	0.32	-0.1
2,771,716	-		MIT1002_02484	0.39	-1.7
2,771,743	+		MIT1002_02484	0.41	+0.3
2,771,790	+		MIT1002_02484	0.45	-0.5
2,771,810	-		MIT1002_02484	0.46	-1.2
2,771,828	+		MIT1002_02484	0.48	+1.7
2,771,842	-		MIT1002_02484	0.49	+0.0
2,771,843	-		MIT1002_02484	0.49	-1.6
2,771,846	+		MIT1002_02484	0.49	-1.2
2,771,852	+		MIT1002_02484	0.49	-0.7
2,771,852	+		MIT1002_02484	0.49	-0.5
2,771,860	-		MIT1002_02484	0.50	-0.9
2,771,868	-		MIT1002_02484	0.50	-0.0
2,771,886	-		MIT1002_02484	0.52	-1.3
2,771,912	+		MIT1002_02484	0.54	+0.7
2,771,912	+		MIT1002_02484	0.54	+1.1
2,771,912	+		MIT1002_02484	0.54	-1.0
2,771,915	-		MIT1002_02484	0.54	+1.6
2,771,920	-		MIT1002_02484	0.54	+0.0
2,771,922	+		MIT1002_02484	0.54	-0.4
2,771,930	-		MIT1002_02484	0.55	+0.5
2,771,930	-		MIT1002_02484	0.55	+0.1
2,771,953	+		MIT1002_02484	0.57	-0.0
2,771,980	-		MIT1002_02484	0.59	-0.5
2,771,982	+		MIT1002_02484	0.59	-0.5
2,772,025	+		MIT1002_02484	0.62	+0.4
2,772,027	+		MIT1002_02484	0.62	+0.2
2,772,027	+		MIT1002_02484	0.62	+0.1
2,772,071	+		MIT1002_02484	0.65	+1.0
2,772,071	+		MIT1002_02484	0.65	+1.6
2,772,084	+		MIT1002_02484	0.66	-0.4
2,772,253	+		MIT1002_02484	0.79	-0.1
2,772,260	-		MIT1002_02484	0.79	+0.9
2,772,308	+		MIT1002_02484	0.83	-0.3
2,772,308	+		MIT1002_02484	0.83	+2.5
2,772,308	+		MIT1002_02484	0.83	+0.9
2,772,308	+		MIT1002_02484	0.83	+0.5
2,772,308	+		MIT1002_02484	0.83	-1.4
2,772,314	-		MIT1002_02484	0.83	-1.5
2,772,316	-		MIT1002_02484	0.83	-2.1
2,772,316	-		MIT1002_02484	0.83	+0.9
2,772,322	+		MIT1002_02484	0.84	-1.3
2,772,323	+		MIT1002_02484	0.84	-0.4
2,772,331	-		MIT1002_02484	0.85	-0.3
2,772,332	-		MIT1002_02484	0.85	+1.1
2,772,436	+				+0.2
2,772,436	+				+0.2
2,772,436	+				-0.0
2,772,438	+				+1.0
2,772,446	-				-1.8
2,772,464	+				+0.1
2,772,469	+				+0.5
2,772,472	+				-0.5
2,772,474	+				-0.4
2,772,474	+				-0.7
2,772,482	-				-0.0
2,772,542	+				-1.4
2,772,550	-				+0.1
2,772,550	-				-0.5
2,772,739	+		MIT1002_02485	0.51	-0.3
2,772,766	+		MIT1002_02485	0.86	+1.1
2,772,776	+				-0.5
2,772,784	-				+0.1
2,772,960	-		MIT1002_02486	0.16	+0.3
2,772,968	-		MIT1002_02486	0.17	-0.3
2,773,087	+		MIT1002_02486	0.43	-0.6
2,773,094	-		MIT1002_02486	0.45	-0.3
2,773,111	+		MIT1002_02486	0.48	+0.2
2,773,197	-		MIT1002_02486	0.67	+0.1
2,773,202	-		MIT1002_02486	0.68	+0.5
2,773,204	+		MIT1002_02486	0.68	+0.7
2,773,212	-		MIT1002_02486	0.70	+0.1
2,773,212	-		MIT1002_02486	0.70	+1.7
2,773,284	+		MIT1002_02486	0.86	+0.3
2,773,292	-		MIT1002_02486	0.87	+0.1
2,773,453	+				+0.2