Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02407

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
2,687,422	-		MIT1002_02405	0.84	-0.2
2,687,456	-		MIT1002_02405	0.86	-1.4
2,687,568	-				+0.8
2,687,568	-				-0.8
2,687,585	-				-1.7
2,687,625	-				-2.1
2,687,732	+				-3.4
2,687,740	-				-2.8
2,687,907	+		MIT1002_02406	0.27	-1.2
2,687,942	+		MIT1002_02406	0.32	-1.8
2,687,945	+		MIT1002_02406	0.32	-2.4
2,687,947	+		MIT1002_02406	0.33	-1.2
2,687,950	-		MIT1002_02406	0.33	-0.2
2,687,968	+		MIT1002_02406	0.36	-1.8
2,688,190	+		MIT1002_02406	0.68	-0.6
2,688,205	+		MIT1002_02406	0.70	-1.2
2,688,470	+				-0.8
2,688,478	-				-0.1
2,688,480	-				-0.7
2,688,488	+				-0.6
2,688,565	+		MIT1002_02407	0.10	-2.1
2,688,845	+		MIT1002_02407	0.29	-1.2
2,688,891	+		MIT1002_02407	0.32	-0.8
2,688,973	+		MIT1002_02407	0.37	-0.2
2,689,127	+		MIT1002_02407	0.48	-2.5
2,689,240	+		MIT1002_02407	0.55	-0.6
2,689,240	+		MIT1002_02407	0.55	-1.8
2,689,473	+		MIT1002_02407	0.71	-0.8
2,689,490	+		MIT1002_02407	0.72	-0.5
2,689,626	+		MIT1002_02407	0.81	-1.2
2,689,772	+				-0.8
2,689,814	+				-0.7
2,689,814	+				-2.0
2,689,822	-				-1.0
2,689,850	+				-0.6
2,689,983	+				+0.5
2,689,991	-				-2.8
2,689,991	-				-0.5
2,690,067	+				+0.9
2,690,067	+				+1.1
2,690,075	-				+0.4
2,690,075	-				+0.0