Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02350

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
2,617,813	+		MIT1002_02349	0.74	-1.3
2,617,813	+		MIT1002_02349	0.74	-3.8
2,617,813	-		MIT1002_02349	0.74	-4.0
2,617,815	+		MIT1002_02349	0.74	-3.7
2,617,815	+		MIT1002_02349	0.74	-4.9
2,617,823	-		MIT1002_02349	0.75	-3.2
2,617,828	-		MIT1002_02349	0.75	-1.1
2,617,878	-		MIT1002_02349	0.80	-3.4
2,617,932	+		MIT1002_02349	0.85	-0.3
2,617,932	+		MIT1002_02349	0.85	-4.0
2,617,932	+		MIT1002_02349	0.85	-2.8
2,617,932	+		MIT1002_02349	0.85	-6.4
2,617,940	-		MIT1002_02349	0.86	-0.8
2,617,940	-		MIT1002_02349	0.86	-1.1
2,617,940	-		MIT1002_02349	0.86	-7.1
2,617,940	-		MIT1002_02349	0.86	-1.8
2,617,958	+		MIT1002_02349	0.88	-3.4
2,617,958	+		MIT1002_02349	0.88	-5.1
2,617,966	-		MIT1002_02349	0.89	-1.8
2,617,969	+		MIT1002_02349	0.89	-2.3
2,617,986	-				-5.4
2,617,991	+				-7.0
2,618,012	+				-1.6
2,618,017	+				-3.2
2,618,017	+				-0.8
2,618,017	+				-3.8
2,618,017	+				-4.8
2,618,017	+				-2.9
2,618,018	+				-4.0
2,618,020	-				-4.6
2,618,025	-				-2.3
2,618,025	-				-4.6
2,618,025	-				-2.4
2,618,025	-				-2.6
2,618,025	-				-7.7
2,618,025	-				-4.2
2,618,025	-				-5.0
2,618,025	-				-5.5
2,618,079	+				-0.3
2,618,087	-				-0.2
2,618,087	-				+1.0
2,618,087	-				-0.2
2,618,087	-				-0.9
2,618,087	-				+0.3
2,618,097	-				-1.0
2,618,127	+				-1.1
2,618,127	+				+1.0
2,618,134	+				-0.1
2,618,134	+				-0.6
2,618,135	-				-1.0
2,618,135	-				+1.0
2,618,139	+				-1.1
2,618,142	-				-0.9
2,618,168	+				+0.6
2,618,168	+				+0.7
2,618,168	+				+1.0
2,618,168	+				-0.1
2,618,176	-				-0.5
2,618,176	-				+0.3
2,618,176	-				+0.8
2,618,176	-				+0.8
2,618,176	-				+0.3
2,618,184	+				+0.7
2,618,184	+				+0.3
2,618,184	+				-1.3
2,618,184	+				+0.1
2,618,184	+				+1.2
2,618,184	+				+1.2
2,618,184	+				+0.3
2,618,184	+				+0.1
2,618,184	+				+0.5
2,618,184	+				-0.1
2,618,184	+				+0.7
2,618,184	+				+0.2
2,618,184	+				-0.4
2,618,184	+				-0.6
2,618,184	+				-0.4
2,618,184	+				+0.2
2,618,184	+				-0.1
2,618,184	+				-0.0
2,618,184	+				+0.1
2,618,184	+				+0.2
2,618,184	+				-0.3
2,618,184	+				+0.2
2,618,184	+				+0.8
2,618,184	+				-1.8
2,618,184	+				+0.1
2,618,184	+				+0.9
2,618,184	+				-0.8
2,618,184	+				-0.5
2,618,184	+				+1.5
2,618,184	+				-0.5
2,618,184	+				-0.5
2,618,184	+				+0.0
2,618,184	+				-0.0
2,618,184	+				-0.1
2,618,184	+				+0.4
2,618,184	+				-1.1
2,618,184	+				+0.1
2,618,184	+				-0.1
2,618,184	+				-0.2
2,618,184	+				+0.4
2,618,184	+				+0.9
2,618,184	+				+0.4
2,618,184	+				-1.2
2,618,184	+				+0.2
2,618,184	+				+1.2
2,618,189	+				-0.2
2,618,189	+				+0.3
2,618,189	+				+0.2
2,618,189	+				+0.3
2,618,192	-				-0.1
2,618,192	-				+0.2
2,618,192	-				+0.0
2,618,192	-				+0.1
2,618,192	-				+1.2
2,618,192	-				+0.1
2,618,192	-				+1.6
2,618,192	-				+0.4
2,618,192	-				+0.8
2,618,192	-				+0.2
2,618,192	-				+0.4
2,618,192	-				+0.6
2,618,192	-				-0.1
2,618,192	-				+1.2
2,618,192	-				+2.4
2,618,192	-				-0.7
2,618,192	-				+0.2
2,618,192	-				+0.2
2,618,192	-				+1.2
2,618,192	-				+1.5
2,618,192	-				+0.7
2,618,192	-				-0.3
2,618,192	-				+0.0
2,618,192	-				+0.4
2,618,192	-				+0.5
2,618,192	-				-0.8
2,618,192	-				-1.7
2,618,192	-				-0.7
2,618,192	-				+1.2
2,618,192	-				+0.6
2,618,192	-				+0.5
2,618,192	-				+0.8
2,618,192	-				-0.8
2,618,192	-				-0.3
2,618,192	-				-0.7
2,618,192	-				-1.2
2,618,192	-				+1.2
2,618,192	-				+0.2
2,618,192	-				-1.3
2,618,192	-				+1.2
2,618,192	-				+0.1
2,618,192	-				-0.1
2,618,192	-				-0.0
2,618,192	-				-0.5
2,618,192	-				-0.5
2,618,192	-				-0.6
2,618,192	-				-0.1
2,618,192	-				+0.2
2,618,192	-				+1.0
2,618,197	-				-3.2
2,618,197	-				-0.7
2,618,208	+				+0.2
2,618,208	+				+0.4
2,618,208	+				-0.1
2,618,208	+				-0.8
2,618,208	+				+0.9
2,618,208	+				-1.3
2,618,208	+				-0.3
2,618,208	+				-0.3
2,618,208	+				+0.3
2,618,208	+				-0.8
2,618,208	+				+0.6
2,618,209	+				-0.2
2,618,209	+				+1.3
2,618,209	+				+0.5
2,618,209	+				-1.3
2,618,212	-				+1.5
2,618,214	+				-2.0
2,618,215	+				-0.0
2,618,215	+				-0.4
2,618,216	+				-1.4
2,618,216	-				+0.3
2,618,216	-				+0.1
2,618,216	-				-0.4
2,618,216	-				-0.7
2,618,216	-				-0.3
2,618,216	-				+0.1
2,618,216	-				-0.3
2,618,216	-				-0.1
2,618,216	-				-2.6
2,618,217	-				-0.5
2,618,217	-				-0.4
2,618,217	-				+0.6
2,618,223	+				-0.5
2,618,223	-				+0.5
2,618,224	-				+0.3
2,618,224	-				-0.3
2,618,249	+				-0.2
2,618,293	+				+1.3
2,618,326	-				-1.6
2,618,352	+				+0.0
2,618,360	-				+1.0
2,618,413	+				+0.4
2,618,413	+				+0.4
2,618,413	+				-0.3
2,618,413	+				-0.4
2,618,413	+				+1.7
2,618,413	+				+0.4
2,618,413	+				+0.4
2,618,421	-				+0.7
2,618,421	-				-1.8
2,618,421	-				-4.4
2,618,421	-				-0.1
2,618,421	-				+0.3
2,618,421	-				+0.3
2,618,421	-				-0.3
2,618,432	+				+0.3
2,618,432	+				-0.3
2,618,435	+				+2.1
2,618,440	-				+0.8
2,618,511	+				-1.3
2,618,533	-				-0.0
2,618,534	-				-0.5
2,618,635	-				-0.6
2,618,649	+				-0.1
2,618,657	-				-0.1
2,618,676	+				-2.6
2,618,717	+				+0.9
2,618,717	+				-1.0
2,618,717	+				+1.0
2,618,717	+				-0.4
2,618,725	-				+0.1
2,618,725	-				+0.2
2,618,725	-				-3.4
2,618,725	-				-0.2
2,618,725	-				+1.7
2,618,725	-				-0.7
2,618,738	-				+0.1
2,618,740	+				-1.0
2,618,740	+				+0.2
2,618,740	+				-1.5
2,618,740	+				+0.5
2,618,745	+				-0.1
2,618,745	+				-0.5
2,618,745	+				-0.8
2,618,745	+				-1.1
2,618,745	+				-1.2
2,618,745	+				+1.2
2,618,745	+				+2.2
2,618,745	+				+0.1
2,618,745	+				+0.2
2,618,745	+				+1.1
2,618,745	+				-0.4
2,618,745	+				-0.1
2,618,745	+				-0.3
2,618,745	+				-1.1
2,618,745	+				+0.9
2,618,748	-				-0.5
2,618,748	-				+1.1
2,618,748	-				-0.2
2,618,748	-				+1.1
2,618,748	-				-1.3
2,618,748	-				-0.6
2,618,753	-				-0.3
2,618,753	-				-0.6
2,618,753	-				-0.4
2,618,753	-				+1.1
2,618,753	-				-1.4
2,618,753	-				+0.3
2,618,753	-				-1.4
2,618,753	-				+0.7
2,618,754	-				+1.7
2,618,764	+				+0.8
2,618,764	+				+0.7
2,618,764	+				+0.5
2,618,764	+				+0.9
2,618,764	+				+0.3
2,618,764	+				+0.5
2,618,764	+				+1.3
2,618,764	+				-0.2
2,618,764	+				-0.9
2,618,764	+				+0.3
2,618,764	+				+0.7
2,618,764	+				+0.6
2,618,764	+				-0.4
2,618,764	+				-0.3
2,618,764	+				+1.8
2,618,764	+				-1.3
2,618,764	+				+0.1
2,618,764	+				-1.7
2,618,764	+				+0.6
2,618,764	+				+0.2
2,618,767	-				-1.6
2,618,772	-				+0.2
2,618,772	-				+0.0
2,618,772	-				-0.0
2,618,772	-				-0.3
2,618,772	-				-0.4
2,618,772	-				+0.4
2,618,772	-				+1.5
2,618,772	-				+0.3
2,618,772	-				-0.1
2,618,772	-				+0.2
2,618,772	-				-1.9
2,618,772	-				+0.1
2,618,772	-				-1.6
2,618,772	-				+0.6
2,618,772	-				-0.6
2,618,772	-				+0.4
2,618,772	-				+0.2
2,618,772	-				+0.6
2,618,772	-				-0.2
2,618,772	-				-0.8
2,618,772	-				+0.4
2,618,772	-				-2.0
2,618,772	-				-2.1
2,618,772	-				-1.0
2,618,772	-				+0.4
2,618,772	-				+0.3
2,618,772	-				+0.7
2,618,772	-				+0.1
2,618,775	+				-0.3
2,618,775	+				-0.7
2,618,775	+				-0.3
2,618,775	+				-2.2
2,618,788	+				-0.3
2,618,796	-				-1.1
2,618,798	+				-1.3
2,618,806	-				+0.6
2,618,806	-				-0.3
2,618,811	-				+0.5
2,618,811	-				-0.6
2,618,828	+				+1.0
2,618,828	+				-0.3
2,618,830	+				+1.3
2,618,833	+				+1.1
2,618,846	-				+0.9
2,618,847	+				-1.3
2,618,847	+				+0.5
2,618,849	-				-0.1
2,618,855	+				+1.0
2,618,860	+				+1.0
2,618,860	+				-0.1
2,618,860	+				-0.2
2,618,860	+				+0.1
2,618,860	+				-0.2
2,618,860	+				-0.5
2,618,863	-				+0.5
2,618,863	-				-1.7
2,618,863	-				-0.3
2,618,863	-				+0.1
2,618,865	+				+0.1
2,618,865	+				-0.5
2,618,867	+				-0.2
2,618,868	-				+0.6
2,618,868	-				-0.5
2,618,868	-				-0.9
2,618,868	-				-1.2
2,618,868	-				-3.1
2,618,868	-				+0.5
2,618,872	+				-2.8
2,618,873	-				+0.2
2,618,874	-				+0.6
2,618,874	-				+1.3
2,618,874	-				-2.5
2,618,874	-				-0.0
2,618,875	-				+0.7
2,618,879	+				+2.2
2,618,887	-				+0.7
2,618,889	+				+0.5
2,618,889	+				-1.0
2,618,889	+				+1.7
2,618,892	-				-0.7
2,618,892	-				+0.5
2,618,892	-				-2.0
2,618,897	-				-1.6
2,618,897	-				+0.7
2,618,897	-				+0.5
2,618,958	-				+0.3
2,618,960	-				+0.1
2,618,968	-				-0.3
2,619,011	-				+0.2
2,619,024	+				+0.1
2,619,029	-				-1.8
2,619,063	+				-0.4
2,619,073	-				-0.2
2,619,083	-				+2.0
2,619,136	+		MIT1002_02350	0.11	+0.0
2,619,142	+		MIT1002_02350	0.12	-0.5
2,619,148	+		MIT1002_02350	0.12	-1.1
2,619,335	+		MIT1002_02350	0.18	+0.3
2,619,352	+		MIT1002_02350	0.19	+0.1
2,619,352	+		MIT1002_02350	0.19	+0.2
2,619,367	-		MIT1002_02350	0.20	+0.7
2,619,367	-		MIT1002_02350	0.20	-0.8
2,619,451	+		MIT1002_02350	0.22	+0.3
2,619,480	-		MIT1002_02350	0.24	-1.4
2,619,492	+		MIT1002_02350	0.24	+0.1
2,619,492	+		MIT1002_02350	0.24	+0.4
2,619,492	+		MIT1002_02350	0.24	+0.7
2,619,492	+		MIT1002_02350	0.24	+0.2
2,619,492	+		MIT1002_02350	0.24	+0.6
2,619,492	+		MIT1002_02350	0.24	+0.9
2,619,492	+		MIT1002_02350	0.24	+1.1
2,619,492	+		MIT1002_02350	0.24	+0.1
2,619,500	-		MIT1002_02350	0.24	-0.7
2,619,500	-		MIT1002_02350	0.24	+0.0
2,619,500	-		MIT1002_02350	0.24	-1.0
2,619,500	-		MIT1002_02350	0.24	-0.1
2,619,500	-		MIT1002_02350	0.24	-1.3
2,619,500	-		MIT1002_02350	0.24	+0.1
2,619,500	-		MIT1002_02350	0.24	-0.3
2,619,500	-		MIT1002_02350	0.24	-0.7
2,619,500	-		MIT1002_02350	0.24	+0.8
2,619,522	-		MIT1002_02350	0.25	-0.9
2,619,542	-		MIT1002_02350	0.26	+3.2
2,619,554	+		MIT1002_02350	0.26	-0.3
2,619,562	-		MIT1002_02350	0.26	-0.3
2,619,599	-		MIT1002_02350	0.28	+0.6
2,619,599	-		MIT1002_02350	0.28	-0.6
2,619,599	-		MIT1002_02350	0.28	+0.6
2,619,610	+		MIT1002_02350	0.28	-1.7
2,619,620	-		MIT1002_02350	0.28	+0.3
2,619,622	-		MIT1002_02350	0.29	+0.6
2,619,622	-		MIT1002_02350	0.29	-0.0
2,619,630	-		MIT1002_02350	0.29	-0.1
2,619,650	+		MIT1002_02350	0.29	-0.2
2,619,651	+		MIT1002_02350	0.30	+0.2
2,619,698	-		MIT1002_02350	0.31	-1.5
2,619,705	+		MIT1002_02350	0.31	+0.4
2,619,745	-		MIT1002_02350	0.33	+1.0
2,619,762	+		MIT1002_02350	0.33	+0.9
2,619,762	+		MIT1002_02350	0.33	-1.4
2,619,762	+		MIT1002_02350	0.33	+1.0
2,619,827	+		MIT1002_02350	0.36	-0.6
2,619,843	+		MIT1002_02350	0.36	+0.2
2,619,843	+		MIT1002_02350	0.36	-0.5
2,619,843	+		MIT1002_02350	0.36	-0.8
2,619,843	+		MIT1002_02350	0.36	+1.2
2,619,843	+		MIT1002_02350	0.36	-0.4
2,619,851	-		MIT1002_02350	0.37	+3.2
2,619,851	-		MIT1002_02350	0.37	-1.0
2,619,851	-		MIT1002_02350	0.37	-0.1
2,619,868	-		MIT1002_02350	0.37	+0.5
2,619,876	+		MIT1002_02350	0.37	-0.0
2,619,919	-		MIT1002_02350	0.39	+0.7
2,619,991	-		MIT1002_02350	0.41	+1.0
2,619,999	+		MIT1002_02350	0.42	+1.5
2,620,020	-		MIT1002_02350	0.43	+0.4
2,620,036	-		MIT1002_02350	0.43	+0.7
2,620,036	-		MIT1002_02350	0.43	-1.0
2,620,064	+		MIT1002_02350	0.44	-0.9
2,620,126	+		MIT1002_02350	0.46	+0.0
2,620,221	+		MIT1002_02350	0.50	+1.0
2,620,231	+		MIT1002_02350	0.50	-0.4
2,620,238	+		MIT1002_02350	0.50	+0.6
2,620,238	+		MIT1002_02350	0.50	+0.5
2,620,238	+		MIT1002_02350	0.50	-1.0
2,620,238	+		MIT1002_02350	0.50	+1.1
2,620,241	+		MIT1002_02350	0.50	-2.0
2,620,246	-		MIT1002_02350	0.50	-0.1
2,620,248	+		MIT1002_02350	0.51	+0.0
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2,621,290	-		MIT1002_02350	0.87	+1.5
2,621,393	+				+0.7
2,621,393	+				+0.4
2,621,393	+				-0.6
2,621,446	-				-2.2
2,621,456	+				+0.2
2,621,497	+				+0.9
2,621,524	-				+4.0
2,621,524	-				+0.1
2,621,534	+				+0.7
2,621,547	+				+1.1
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2,621,555	-				-0.0
2,621,555	-				-0.2
2,621,583	+				+0.4
2,621,612	-				+0.2
2,621,612	-				+1.0
2,621,636	-				+0.3
2,621,669	-				-0.3
2,621,669	-				+1.2
2,621,748	+				+0.5
2,621,804	-		MIT1002_02351	0.17	+0.9
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2,622,150	+				+0.7
2,622,216	+				-0.3
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2,622,235	+				+1.5
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2,622,286	+				-0.0
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2,622,294	-				-0.5
2,622,467	-				-0.3
2,622,475	+				+1.6
2,622,477	+				+0.8
2,622,482	+				-0.2
2,622,484	+				+0.2
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