Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02263

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
2,517,980	-		MIT1002_02262	0.67	+0.3
2,517,998	+		MIT1002_02262	0.68	-0.4
2,518,004	-		MIT1002_02262	0.68	-1.6
2,518,004	-		MIT1002_02262	0.68	+0.3
2,518,010	+		MIT1002_02262	0.68	+0.4
2,518,044	+		MIT1002_02262	0.70	-1.9
2,518,044	+		MIT1002_02262	0.70	-1.3
2,518,044	+		MIT1002_02262	0.70	+0.4
2,518,052	-		MIT1002_02262	0.70	-1.3
2,518,052	-		MIT1002_02262	0.70	+0.5
2,518,115	+		MIT1002_02262	0.73	+0.7
2,518,222	+		MIT1002_02262	0.77	+1.7
2,518,236	+		MIT1002_02262	0.77	-2.4
2,518,244	-		MIT1002_02262	0.78	+0.1
2,518,269	-		MIT1002_02262	0.79	+0.1
2,518,335	+		MIT1002_02262	0.81	-0.9
2,518,337	+		MIT1002_02262	0.82	-1.0
2,518,345	-		MIT1002_02262	0.82	-1.4
2,518,345	-		MIT1002_02262	0.82	+0.3
2,518,345	-		MIT1002_02262	0.82	+0.4
2,518,479	-		MIT1002_02262	0.87	-0.2
2,518,479	-		MIT1002_02262	0.87	+0.1
2,518,558	+				+0.7
2,518,558	+				+0.7
2,518,565	+				+0.6
2,518,565	-				+0.6
2,518,566	-				+0.7
2,518,566	-				+2.0
2,518,566	-				-0.9
2,518,566	-				-0.6
2,518,566	-				+0.4
2,518,573	-				-1.1
2,518,639	+				-1.3
2,518,639	+				-0.9
2,518,639	+				-1.0
2,518,639	+				-0.5
2,518,639	+				+0.3
2,518,639	+				-0.7
2,518,639	+				+0.7
2,518,639	+				-0.3
2,518,639	+				-0.4
2,518,639	+				+1.1
2,518,647	-				+0.6
2,518,647	-				-1.5
2,518,647	-				+2.3
2,518,647	-				-1.0
2,518,647	-				+0.2
2,518,647	-				-0.3
2,518,647	-				-2.4
2,518,647	-				-0.6
2,518,647	-				+0.3
2,518,667	-				-0.3
2,518,677	-				+0.9
2,518,777	-				-0.7
2,518,971	-				+1.2
2,518,988	+				-0.3
2,519,026	+				+1.3
2,519,056	+		MIT1002_02263	0.15	-0.2
2,519,056	+		MIT1002_02263	0.15	+1.6
2,519,073	+		MIT1002_02263	0.18	-2.2
2,519,081	-		MIT1002_02263	0.19	+0.8
2,519,081	-		MIT1002_02263	0.19	+0.1
2,519,081	-		MIT1002_02263	0.19	-0.3
2,519,139	+		MIT1002_02263	0.30	+0.6
2,519,193	+		MIT1002_02263	0.39	-0.2
2,519,282	+		MIT1002_02263	0.55	+0.5
2,519,282	+		MIT1002_02263	0.55	+0.1
2,519,282	+		MIT1002_02263	0.55	-0.4
2,519,317	-		MIT1002_02263	0.62	+0.2
2,519,433	-		MIT1002_02263	0.83	-0.3
2,519,433	-		MIT1002_02263	0.83	-0.1
2,519,462	-		MIT1002_02263	0.88	+0.8
2,519,490	-				+0.3
2,519,502	+				+0.1
2,519,502	+				-0.9
2,519,510	-				+2.0
2,519,510	-				-0.1
2,519,514	+				-0.7
2,519,539	+				-0.7
2,519,547	-				-0.5
2,519,549	+				+0.5
2,519,557	-				-0.4
2,519,557	-				+0.9
2,519,557	-				+1.8
2,519,561	+				-0.3
2,519,597	-				+1.0
2,519,651	-				-1.1
2,519,698	+				-0.2
2,519,706	-				+0.4
2,519,859	+		MIT1002_02264	0.26	+1.1
2,519,859	+		MIT1002_02264	0.26	-0.0
2,519,859	+		MIT1002_02264	0.26	-1.2
2,519,867	-		MIT1002_02264	0.28	-0.5
2,519,874	-		MIT1002_02264	0.29	-0.5
2,519,930	+		MIT1002_02264	0.38	+0.7
2,519,965	+		MIT1002_02264	0.44	+0.3
2,520,164	+		MIT1002_02264	0.77	+1.0
2,520,164	+		MIT1002_02264	0.77	+0.5
2,520,172	-		MIT1002_02264	0.78	+0.6
2,520,172	-		MIT1002_02264	0.78	+0.3
2,520,172	-		MIT1002_02264	0.78	-1.9
2,520,172	-		MIT1002_02264	0.78	-0.5
2,520,172	-		MIT1002_02264	0.78	+0.4
2,520,182	-		MIT1002_02264	0.80	+0.1
2,520,187	+		MIT1002_02264	0.81	+0.3
2,520,465	+				-2.1
2,520,499	+				-0.7
2,520,507	-				-0.9
2,520,507	-				-1.9
2,520,512	-				-0.0