Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02257

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
2,510,549	+		MIT1002_02255	0.31	-1.4
2,510,551	-		MIT1002_02255	0.31	-0.6
2,510,562	-		MIT1002_02255	0.32	-0.3
2,510,588	+		MIT1002_02255	0.35	-0.3
2,510,623	+		MIT1002_02255	0.40	-0.6
2,510,631	+		MIT1002_02255	0.40	-1.3
2,510,631	-		MIT1002_02255	0.40	-0.7
2,510,655	-		MIT1002_02255	0.43	+0.1
2,510,655	-		MIT1002_02255	0.43	+0.3
2,510,687	-		MIT1002_02255	0.47	-0.6
2,510,724	+		MIT1002_02255	0.51	-0.3
2,510,792	+		MIT1002_02255	0.59	+0.5
2,510,792	+		MIT1002_02255	0.59	+0.4
2,510,800	-		MIT1002_02255	0.60	+0.9
2,510,806	-		MIT1002_02255	0.61	+0.7
2,510,814	+		MIT1002_02255	0.62	-0.9
2,510,835	-		MIT1002_02255	0.64	+0.1
2,510,849	-		MIT1002_02255	0.66	-1.1
2,510,895	-		MIT1002_02255	0.71	+0.0
2,510,932	+		MIT1002_02255	0.76	+1.6
2,510,932	+		MIT1002_02255	0.76	-0.2
2,510,940	-		MIT1002_02255	0.77	+0.5
2,511,014	+		MIT1002_02255	0.85	+0.6
2,511,022	-		MIT1002_02255	0.86	-0.4
2,511,044	+		MIT1002_02255	0.89	-0.1
2,511,045	+		MIT1002_02255	0.89	-0.2
2,511,090	-				-0.8
2,511,141	-				+0.0
2,511,163	+				+0.5
2,511,163	+				+0.1
2,511,202	+				+0.9
2,511,204	+		MIT1002_02256	0.10	-1.2
2,511,207	-		MIT1002_02256	0.11	-0.3
2,511,209	+		MIT1002_02256	0.12	+0.6
2,511,209	+		MIT1002_02256	0.12	+0.7
2,511,212	+		MIT1002_02256	0.12	-0.7
2,511,212	-		MIT1002_02256	0.12	+0.5
2,511,244	-		MIT1002_02256	0.21	+0.4
2,511,360	+		MIT1002_02256	0.53	-0.5
2,511,366	-		MIT1002_02256	0.54	-0.4
2,511,366	-		MIT1002_02256	0.54	+1.5
2,511,368	-		MIT1002_02256	0.55	-0.4
2,511,368	-		MIT1002_02256	0.55	-0.2
2,511,368	-		MIT1002_02256	0.55	-0.0
2,511,368	-		MIT1002_02256	0.55	-0.8
2,511,409	-		MIT1002_02256	0.66	+0.4
2,511,523	-				-0.2
2,511,537	-				+0.2
2,511,537	-				+0.1
2,511,537	-				+0.7
2,511,537	-				-0.9
2,511,648	-		MIT1002_02257	0.26	+0.2
2,511,655	-		MIT1002_02257	0.28	-0.8
2,511,690	+		MIT1002_02257	0.38	+0.6
2,511,848	-		MIT1002_02257	0.79	+0.8
2,511,864	-		MIT1002_02257	0.84	+1.2
2,511,959	+				-0.7
2,512,312	+		MIT1002_02258	0.50	+0.3
2,512,388	-		MIT1002_02258	0.60	+0.8
2,512,404	+		MIT1002_02258	0.62	-1.0
2,512,404	+		MIT1002_02258	0.62	+0.5
2,512,404	+		MIT1002_02258	0.62	-0.7
2,512,456	-		MIT1002_02258	0.68	-0.1
2,512,523	-		MIT1002_02258	0.77	+1.6
2,512,534	+		MIT1002_02258	0.78	-0.1
2,512,548	+		MIT1002_02258	0.80	-0.1
2,512,557	-		MIT1002_02258	0.81	+1.2
2,512,615	-		MIT1002_02258	0.88	+0.0
2,512,645	-				+1.9
2,512,674	+				+1.3
2,512,682	-				-1.1
2,512,684	-				+0.4
2,512,690	-				-0.0
2,512,758	+				+1.2
2,512,760	-				-0.9
2,512,792	+				+0.2
2,512,817	+				-1.8
2,512,819	+				+1.1
2,512,848	-				-1.0
2,512,857	+				-0.9
2,512,874	+				+0.3
2,512,891	+				+0.4
2,512,904	-				-0.3