Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02094

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
2,354,796	+		MIT1002_02092	0.40	+0.3
2,354,812	+		MIT1002_02092	0.42	+0.3
2,354,886	-		MIT1002_02092	0.49	+1.1
2,354,975	+		MIT1002_02092	0.57	+0.3
2,354,983	-		MIT1002_02092	0.58	+0.3
2,355,018	+		MIT1002_02092	0.61	-0.9
2,355,069	-		MIT1002_02092	0.66	+1.6
2,355,084	+		MIT1002_02092	0.67	-0.1
2,355,084	+		MIT1002_02092	0.67	+1.4
2,355,137	+		MIT1002_02092	0.72	-2.5
2,355,236	+		MIT1002_02092	0.82	+0.7
2,355,290	-		MIT1002_02092	0.87	+0.3
2,355,389	-				+0.3
2,355,417	-				-0.4
2,355,431	-				-0.4
2,355,529	-		MIT1002_02093	0.25	+1.1
2,355,563	+		MIT1002_02093	0.35	+0.7
2,355,563	+		MIT1002_02093	0.35	-0.1
2,355,571	-		MIT1002_02093	0.37	-0.3
2,355,578	-		MIT1002_02093	0.39	-1.7
2,355,617	+		MIT1002_02093	0.50	-1.9
2,355,630	+		MIT1002_02093	0.54	-0.2
2,355,630	+		MIT1002_02093	0.54	+0.2
2,355,630	+		MIT1002_02093	0.54	+0.5
2,355,638	-		MIT1002_02093	0.57	+1.2
2,355,658	-		MIT1002_02093	0.62	+0.4
2,355,663	+		MIT1002_02093	0.64	-1.3
2,355,668	+		MIT1002_02093	0.65	-0.3
2,355,671	-		MIT1002_02093	0.66	+1.6
2,355,671	-		MIT1002_02093	0.66	+2.6
2,355,671	-		MIT1002_02093	0.66	-1.0
2,355,671	-		MIT1002_02093	0.66	+1.4
2,355,753	+				-0.5
2,355,926	-		MIT1002_02094	0.15	+1.3
2,356,137	+		MIT1002_02094	0.38	+0.3
2,356,138	-		MIT1002_02094	0.38	-0.3
2,356,148	-		MIT1002_02094	0.39	+0.4
2,356,195	-		MIT1002_02094	0.44	-0.0
2,356,248	+		MIT1002_02094	0.50	+2.1
2,356,276	+		MIT1002_02094	0.53	-0.6
2,356,341	-		MIT1002_02094	0.60	-0.5
2,356,411	+		MIT1002_02094	0.68	-0.6
2,356,414	+		MIT1002_02094	0.68	+0.3
2,356,530	-		MIT1002_02094	0.81	+2.2
2,356,611	+		MIT1002_02094	0.90	+0.8
2,356,696	+				+0.1
2,356,857	-				+0.1
2,356,862	-				-0.1
2,356,904	+				+1.3
2,356,912	-				+0.5
2,356,912	-				-0.3
2,356,912	-				+0.2
2,356,912	-				-0.3
2,356,913	-				-1.3
2,357,019	+		MIT1002_02095	0.16	-0.3
2,357,225	-		MIT1002_02095	0.30	-0.5
2,357,282	+		MIT1002_02095	0.34	-0.5
2,357,290	-		MIT1002_02095	0.35	+0.7
2,357,290	-		MIT1002_02095	0.35	+0.2
2,357,308	+		MIT1002_02095	0.36	+0.4
2,357,316	-		MIT1002_02095	0.37	+1.4
2,357,316	-		MIT1002_02095	0.37	-0.1
2,357,316	-		MIT1002_02095	0.37	+0.6
2,357,316	-		MIT1002_02095	0.37	-0.5
2,357,340	+		MIT1002_02095	0.38	-0.6
2,357,375	-		MIT1002_02095	0.41	+0.2
2,357,448	-		MIT1002_02095	0.46	-0.1
2,357,500	+		MIT1002_02095	0.49	-2.7
2,357,519	+		MIT1002_02095	0.51	+0.4
2,357,658	+		MIT1002_02095	0.60	-0.3
2,357,682	-		MIT1002_02095	0.62	-0.7