Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01881

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
2,091,905	+		MIT1002_01880	0.13	+0.2
2,091,905	+		MIT1002_01880	0.13	-0.7
2,091,926	-		MIT1002_01880	0.16	-0.5
2,091,958	+		MIT1002_01880	0.20	+0.9
2,092,002	+		MIT1002_01880	0.25	+0.9
2,092,007	+		MIT1002_01880	0.26	+0.6
2,092,007	+		MIT1002_01880	0.26	-0.2
2,092,028	+		MIT1002_01880	0.28	+0.6
2,092,030	-		MIT1002_01880	0.28	+1.6
2,092,098	+		MIT1002_01880	0.37	-0.9
2,092,127	-		MIT1002_01880	0.40	-0.4
2,092,146	+		MIT1002_01880	0.42	+0.3
2,092,177	+		MIT1002_01880	0.46	-0.0
2,092,180	-		MIT1002_01880	0.46	-1.8
2,092,183	+		MIT1002_01880	0.47	-0.9
2,092,183	+		MIT1002_01880	0.47	+1.5
2,092,293	-		MIT1002_01880	0.60	-0.7
2,092,316	-		MIT1002_01880	0.63	-0.5
2,092,326	+		MIT1002_01880	0.64	-0.5
2,092,441	-		MIT1002_01880	0.78	-1.8
2,092,494	+		MIT1002_01880	0.84	-0.3
2,092,540	+		MIT1002_01880	0.90	+0.7
2,092,698	+				+0.7
2,092,706	-				+0.1
2,092,706	-				+0.4
2,092,817	-				+1.3
2,092,824	+				+0.8
2,092,839	+				-0.6
2,092,941	+		MIT1002_01881	0.23	-0.2
2,092,949	-		MIT1002_01881	0.25	+0.1
2,092,974	-		MIT1002_01881	0.29	-0.1
2,093,008	+		MIT1002_01881	0.35	-0.1
2,093,016	-		MIT1002_01881	0.36	+0.6
2,093,121	+		MIT1002_01881	0.54	+0.2
2,093,236	+		MIT1002_01881	0.73	-2.1
2,093,236	+		MIT1002_01881	0.73	-0.2
2,093,432	-				+0.1
2,093,457	+				-1.5
2,093,459	+				-0.1
2,093,459	+				-1.7
2,093,467	-				-1.8
2,093,467	-				-1.5
2,093,483	+				-0.2
2,093,491	-				-0.3
2,093,495	+				+0.9
2,093,495	+				+0.9
2,093,503	-				+0.4
2,093,503	-				+0.1
2,093,516	-				+1.0
2,093,648	-				+1.8
2,093,691	-				+0.8
2,093,774	+				-0.9
2,093,799	+				-0.6
2,093,995	-				+1.2
2,094,005	+				+0.3
2,094,010	+				+2.4
2,094,013	-				-0.0
2,094,181	-		MIT1002_01882	0.19	-0.4