Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01735

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
1,928,296	+				-1.2
1,928,296	+				-0.0
1,928,408	+				+0.0
1,928,437	-				+0.2
1,928,443	-				-0.4
1,928,458	+				-0.4
1,928,466	-				-2.1
1,928,617	-		MIT1002_01736	0.11	-2.2
1,928,633	-		MIT1002_01736	0.13	-3.9
1,928,713	+		MIT1002_01736	0.23	-2.9
1,928,729	-		MIT1002_01736	0.24	-4.6
1,928,802	-		MIT1002_01736	0.33	-3.8
1,928,809	+		MIT1002_01736	0.34	-1.5
1,928,844	-		MIT1002_01736	0.38	-4.4
1,928,858	+		MIT1002_01736	0.40	-3.1
1,928,859	+		MIT1002_01736	0.40	-2.8
1,928,859	+		MIT1002_01736	0.40	-3.2
1,928,859	+		MIT1002_01736	0.40	-2.9
1,928,859	+		MIT1002_01736	0.40	-3.7
1,928,859	+		MIT1002_01736	0.40	-1.9
1,928,859	+		MIT1002_01736	0.40	-1.5
1,928,859	+		MIT1002_01736	0.40	-0.5
1,928,859	+		MIT1002_01736	0.40	-2.0
1,928,859	+		MIT1002_01736	0.40	-4.2
1,928,859	+		MIT1002_01736	0.40	-0.8
1,928,859	+		MIT1002_01736	0.40	-0.5
1,928,859	+		MIT1002_01736	0.40	-1.8
1,928,859	+		MIT1002_01736	0.40	-3.3
1,928,859	+		MIT1002_01736	0.40	-4.5
1,928,859	+		MIT1002_01736	0.40	-2.8
1,928,859	+		MIT1002_01736	0.40	-3.4
1,928,859	+		MIT1002_01736	0.40	-4.1
1,928,859	+		MIT1002_01736	0.40	-3.0
1,928,859	+		MIT1002_01736	0.40	-2.4
1,928,859	+		MIT1002_01736	0.40	-2.4
1,928,859	+		MIT1002_01736	0.40	-3.9
1,928,859	-		MIT1002_01736	0.40	-3.3
1,928,867	-		MIT1002_01736	0.41	-0.8
1,928,867	-		MIT1002_01736	0.41	-3.7
1,928,867	-		MIT1002_01736	0.41	-0.8
1,928,867	-		MIT1002_01736	0.41	-4.0
1,928,867	-		MIT1002_01736	0.41	-0.8
1,928,867	-		MIT1002_01736	0.41	-4.5
1,928,867	-		MIT1002_01736	0.41	-1.5
1,928,867	-		MIT1002_01736	0.41	-3.0
1,928,867	-		MIT1002_01736	0.41	-3.3
1,928,867	-		MIT1002_01736	0.41	-1.6
1,928,903	+		MIT1002_01736	0.45	-4.0
1,928,967	-		MIT1002_01736	0.52	-2.8
1,928,967	-		MIT1002_01736	0.52	-4.5
1,928,967	-		MIT1002_01736	0.52	-3.1
1,928,969	+		MIT1002_01736	0.53	-5.3
1,928,969	+		MIT1002_01736	0.53	-4.6
1,928,977	-		MIT1002_01736	0.54	-2.4
1,928,977	-		MIT1002_01736	0.54	-3.6
1,928,977	-		MIT1002_01736	0.54	-3.0
1,929,010	+		MIT1002_01736	0.57	-3.3
1,929,018	-		MIT1002_01736	0.58	-2.0
1,929,020	+		MIT1002_01736	0.59	-3.2
1,929,045	-		MIT1002_01736	0.62	-5.1
1,929,099	-		MIT1002_01736	0.68	-3.9
1,929,247	+		MIT1002_01736	0.85	-2.6