Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01663

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
1,836,177	+				-0.5
1,836,291	+				-0.4
1,836,311	+				+0.1
1,836,319	-				-1.2
1,836,319	-				-1.3
1,836,444	+				-1.9
1,836,537	+				-0.5
1,836,596	-				+0.1
1,836,607	+				+0.4
1,836,741	+		MIT1002_01662	0.34	-0.6
1,836,778	+		MIT1002_01662	0.40	-0.5
1,836,793	+		MIT1002_01662	0.43	-0.2
1,836,803	+		MIT1002_01662	0.45	+0.1
1,836,859	+		MIT1002_01662	0.56	-1.8
1,836,869	-		MIT1002_01662	0.57	+0.4
1,836,871	+		MIT1002_01662	0.58	-0.9
1,836,910	+		MIT1002_01662	0.65	-2.6
1,836,955	+		MIT1002_01662	0.74	+0.1
1,836,955	+		MIT1002_01662	0.74	-0.1
1,836,987	+		MIT1002_01662	0.80	-1.0
1,837,007	+		MIT1002_01662	0.83	+0.3
1,837,141	-				+0.1
1,837,166	+				-1.4
1,837,336	-		MIT1002_01663	0.14	-0.1
1,837,384	+		MIT1002_01663	0.18	+0.2
1,837,392	-		MIT1002_01663	0.19	+0.3
1,837,392	-		MIT1002_01663	0.19	-1.0
1,837,618	-		MIT1002_01663	0.39	+0.2
1,837,725	-		MIT1002_01663	0.48	+1.6
1,837,754	-		MIT1002_01663	0.50	+0.1
1,837,756	+		MIT1002_01663	0.51	-0.7
1,837,768	+		MIT1002_01663	0.52	+1.8
1,837,768	+		MIT1002_01663	0.52	+0.3
1,837,846	-		MIT1002_01663	0.58	+1.8
1,837,926	+		MIT1002_01663	0.65	+0.1
1,838,027	+		MIT1002_01663	0.74	+0.3
1,838,061	+		MIT1002_01663	0.77	+0.8
1,838,069	-		MIT1002_01663	0.78	+1.2
1,838,069	-		MIT1002_01663	0.78	-1.1
1,838,090	-		MIT1002_01663	0.79	-0.2
1,838,092	+		MIT1002_01663	0.80	+0.4
1,838,130	+		MIT1002_01663	0.83	+0.8
1,838,218	+				+0.3
1,838,228	+				+0.0
1,838,236	-				-0.8
1,838,236	-				-0.4
1,838,248	-				-0.7
1,838,308	-				-2.1
1,838,407	-				-0.1
1,838,409	+				-0.2
1,838,409	+				-1.0
1,838,485	+		MIT1002_01664	0.16	+2.4
1,838,572	+		MIT1002_01664	0.24	+0.8
1,838,757	-		MIT1002_01664	0.43	-1.9
1,838,879	-		MIT1002_01664	0.56	-1.1
1,838,900	+		MIT1002_01664	0.58	+1.1
1,838,922	-		MIT1002_01664	0.60	-0.6
1,839,051	+		MIT1002_01664	0.73	-1.5
1,839,075	-		MIT1002_01664	0.76	-0.6
1,839,104	+		MIT1002_01664	0.79	+0.4