Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01412

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
1,555,404	+				+0.2
1,555,429	-				+0.1
1,555,450	-				+0.1
1,555,469	-				-0.2
1,555,536	+		MIT1002_01411	0.16	+0.2
1,555,579	-		MIT1002_01411	0.20	+1.0
1,555,593	+		MIT1002_01411	0.22	+0.2
1,555,612	-		MIT1002_01411	0.24	+0.4
1,555,612	-		MIT1002_01411	0.24	-0.1
1,555,651	-		MIT1002_01411	0.28	-0.3
1,555,667	-		MIT1002_01411	0.30	-0.0
1,555,694	-		MIT1002_01411	0.33	-0.5
1,555,702	+		MIT1002_01411	0.33	+1.5
1,555,742	+		MIT1002_01411	0.38	-0.9
1,555,742	-		MIT1002_01411	0.38	-0.6
1,555,760	+		MIT1002_01411	0.40	-0.6
1,555,823	-		MIT1002_01411	0.46	-0.4
1,555,872	+		MIT1002_01411	0.52	+0.1
1,555,872	+		MIT1002_01411	0.52	+0.0
1,555,920	-		MIT1002_01411	0.57	-0.0
1,555,933	+		MIT1002_01411	0.58	+0.2
1,555,946	-		MIT1002_01411	0.59	-0.8
1,556,091	+		MIT1002_01411	0.75	+1.8
1,556,091	+		MIT1002_01411	0.75	-0.5
1,556,091	+		MIT1002_01411	0.75	+1.2
1,556,091	+		MIT1002_01411	0.75	+0.1
1,556,091	+		MIT1002_01411	0.75	+1.4
1,556,099	-		MIT1002_01411	0.76	-0.4
1,556,111	-		MIT1002_01411	0.77	+1.0
1,556,121	+		MIT1002_01411	0.78	+0.2
1,556,129	-		MIT1002_01411	0.79	+2.1
1,556,129	-		MIT1002_01411	0.79	-0.3
1,556,192	-		MIT1002_01411	0.86	-2.1
1,556,257	-				+0.7
1,556,294	+				-0.6
1,556,345	+				-0.0
1,556,362	-				+0.2
1,556,376	-				-0.0
1,556,385	+				+0.4
1,556,394	+				-0.3
1,556,453	-				+1.4
1,556,539	+		MIT1002_01412	0.19	-1.1
1,556,539	+		MIT1002_01412	0.19	-0.3
1,556,559	+		MIT1002_01412	0.21	+0.2
1,556,567	-		MIT1002_01412	0.22	-0.5
1,556,577	-		MIT1002_01412	0.23	+0.5
1,556,633	+		MIT1002_01412	0.28	-0.6
1,556,644	-		MIT1002_01412	0.30	-0.5
1,556,734	+		MIT1002_01412	0.39	-1.6
1,556,777	+		MIT1002_01412	0.43	+0.1
1,556,784	+		MIT1002_01412	0.44	+0.1
1,556,784	+		MIT1002_01412	0.44	-0.8
1,556,792	-		MIT1002_01412	0.45	-0.8
1,556,792	-		MIT1002_01412	0.45	+0.6
1,556,794	+		MIT1002_01412	0.45	-0.8
1,556,990	+		MIT1002_01412	0.65	-0.0
1,557,015	+		MIT1002_01412	0.68	+0.3
1,557,084	-		MIT1002_01412	0.75	+0.9
1,557,084	-		MIT1002_01412	0.75	-0.2
1,557,108	-		MIT1002_01412	0.77	-0.2
1,557,124	+		MIT1002_01412	0.79	+0.9
1,557,132	-		MIT1002_01412	0.80	+1.0
1,557,132	-		MIT1002_01412	0.80	-0.7
1,557,132	-		MIT1002_01412	0.80	+0.8
1,557,170	+		MIT1002_01412	0.83	-1.2
1,557,214	+		MIT1002_01412	0.88	+1.5
1,557,246	+				-0.2
1,557,287	+				+1.6
1,557,328	-				+0.1
1,557,401	+				+0.7
1,557,401	+				-1.3
1,557,502	-				-0.2
1,557,599	+				+0.4
1,557,687	-		MIT1002_01413	0.14	-0.7
1,557,713	+		MIT1002_01413	0.28	+0.0
1,557,734	-		MIT1002_01413	0.39	+0.8
1,557,773	+		MIT1002_01413	0.61	-0.6
1,557,797	+		MIT1002_01413	0.74	+0.2
1,557,797	+		MIT1002_01413	0.74	-0.1
1,557,968	-		MIT1002_01414	0.12	+0.5
1,557,973	-		MIT1002_01414	0.13	-1.3
1,558,006	-		MIT1002_01414	0.18	-0.9
1,558,086	+		MIT1002_01414	0.30	+0.3
1,558,148	-		MIT1002_01414	0.39	+1.2
1,558,153	+		MIT1002_01414	0.40	+0.1
1,558,251	+		MIT1002_01414	0.55	-0.1
1,558,253	+		MIT1002_01414	0.55	+1.6
1,558,254	-		MIT1002_01414	0.55	+0.4
1,558,254	-		MIT1002_01414	0.55	+0.0
1,558,259	-		MIT1002_01414	0.56	+0.2
1,558,259	-		MIT1002_01414	0.56	-2.0