Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01399

Experiment: monoculture; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 1
1,548,812	-		MIT1002_01397	0.66	-0.0
1,548,814	+		MIT1002_01397	0.66	-1.1
1,548,815	+		MIT1002_01397	0.66	+0.3
1,548,855	-		MIT1002_01397	0.68	-0.3
1,548,892	-		MIT1002_01397	0.70	+0.8
1,548,923	-		MIT1002_01397	0.72	+0.7
1,549,012	-		MIT1002_01397	0.78	-1.3
1,549,064	-		MIT1002_01397	0.81	+0.0
1,549,087	-		MIT1002_01397	0.83	-0.8
1,549,124	-		MIT1002_01397	0.85	-0.4
1,549,228	+				+0.7
1,549,236	-				+0.4
1,549,236	-				+0.2
1,549,306	-				-1.1
1,549,390	+				-0.5
1,549,422	+				+1.5
1,549,433	-				-0.0
1,549,445	+				+0.7
1,549,466	+				+0.4
1,549,526	+				-2.1
1,549,545	+				-0.6
1,549,634	-		MIT1002_01398	0.22	+1.4
1,549,718	-				+1.9
1,549,721	+				+0.1
1,549,754	-		MIT1002_01399	0.32	-0.5
1,550,146	+				-0.6
1,550,252	-				+0.1
1,550,266	-				-1.0
1,550,361	+				+0.2
1,550,369	-				+0.9
1,550,473	-				-0.1
1,550,473	-				+0.8
1,550,538	+				+0.3
1,550,538	+				-0.2
1,550,600	-				-1.8
1,550,603	+				-1.1
1,550,603	+				-0.3
1,550,611	-				-1.3
1,550,695	-				-0.8
1,550,711	-				+0.6
1,550,794	+				-0.7