Experiment: Filtered_supernatant_MT183_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS33755 and QEN71_RS33760 are separated by 26 nucleotides QEN71_RS33760 and QEN71_RS33765 overlap by 4 nucleotides QEN71_RS33765 and QEN71_RS33770 are separated by 10 nucleotides
QEN71_RS33755: QEN71_RS33755 - glutamine ABC transporter substrate-binding protein GlnH, at 894,178 to 894,924
_RS33755
QEN71_RS33760: QEN71_RS33760 - glutamine ABC transporter permease GlnP, at 894,951 to 895,607
_RS33760
QEN71_RS33765: QEN71_RS33765 - glutamine ABC transporter ATP-binding protein GlnQ, at 895,604 to 896,341
_RS33765
QEN71_RS33770: QEN71_RS33770 - C45 family peptidase, at 896,352 to 897,437
_RS33770
Position (kb) 894
895
896 Strain fitness (log2 ratio) -2
-1
0
1
2 at 894.188 kb on + strand at 894.188 kb on + strand at 894.313 kb on + strand, within QEN71_RS33755 at 894.314 kb on - strand, within QEN71_RS33755 at 894.314 kb on - strand, within QEN71_RS33755 at 894.314 kb on - strand, within QEN71_RS33755 at 894.314 kb on - strand, within QEN71_RS33755 at 894.371 kb on - strand, within QEN71_RS33755 at 894.501 kb on - strand, within QEN71_RS33755 at 894.591 kb on + strand, within QEN71_RS33755 at 894.592 kb on - strand, within QEN71_RS33755 at 894.592 kb on - strand, within QEN71_RS33755 at 894.667 kb on + strand, within QEN71_RS33755 at 894.711 kb on + strand, within QEN71_RS33755 at 894.728 kb on - strand, within QEN71_RS33755 at 894.728 kb on - strand, within QEN71_RS33755 at 894.730 kb on + strand, within QEN71_RS33755 at 894.730 kb on + strand, within QEN71_RS33755 at 894.874 kb on + strand at 894.886 kb on + strand at 894.886 kb on + strand at 894.886 kb on + strand at 894.887 kb on - strand at 894.887 kb on - strand at 894.926 kb on - strand at 895.174 kb on - strand, within QEN71_RS33760 at 895.174 kb on - strand, within QEN71_RS33760 at 895.201 kb on + strand, within QEN71_RS33760 at 895.202 kb on - strand, within QEN71_RS33760 at 895.257 kb on + strand, within QEN71_RS33760 at 895.348 kb on + strand, within QEN71_RS33760 at 895.540 kb on - strand, within QEN71_RS33760 at 895.540 kb on - strand, within QEN71_RS33760 at 895.540 kb on - strand, within QEN71_RS33760 at 895.603 kb on + strand at 895.603 kb on + strand at 895.603 kb on + strand at 895.604 kb on - strand at 895.604 kb on - strand at 895.660 kb on + strand at 895.660 kb on + strand at 895.757 kb on + strand, within QEN71_RS33765 at 895.757 kb on - strand, within QEN71_RS33765 at 895.757 kb on - strand, within QEN71_RS33765 at 896.016 kb on - strand, within QEN71_RS33765 at 896.176 kb on + strand, within QEN71_RS33765 at 896.177 kb on - strand, within QEN71_RS33765 at 896.258 kb on - strand, within QEN71_RS33765 at 896.258 kb on - strand, within QEN71_RS33765 at 896.367 kb on + strand at 896.367 kb on + strand at 896.367 kb on + strand at 896.367 kb on + strand at 896.368 kb on - strand at 896.369 kb on + strand at 896.370 kb on - strand at 896.371 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT183_in_LB remove 894,188 + -0.4 894,188 + -0.0 894,313 + QEN71_RS33755 0.18 +1.4 894,314 - QEN71_RS33755 0.18 -0.3 894,314 - QEN71_RS33755 0.18 +1.3 894,314 - QEN71_RS33755 0.18 +0.1 894,314 - QEN71_RS33755 0.18 +1.1 894,371 - QEN71_RS33755 0.26 -1.0 894,501 - QEN71_RS33755 0.43 -0.0 894,591 + QEN71_RS33755 0.55 +0.0 894,592 - QEN71_RS33755 0.55 +0.8 894,592 - QEN71_RS33755 0.55 -0.4 894,667 + QEN71_RS33755 0.65 -0.5 894,711 + QEN71_RS33755 0.71 +0.3 894,728 - QEN71_RS33755 0.74 +1.1 894,728 - QEN71_RS33755 0.74 +0.3 894,730 + QEN71_RS33755 0.74 +1.1 894,730 + QEN71_RS33755 0.74 -1.2 894,874 + +0.3 894,886 + -0.1 894,886 + +0.3 894,886 + -0.6 894,887 - +1.0 894,887 - +1.1 894,926 - -0.3 895,174 - QEN71_RS33760 0.34 +0.8 895,174 - QEN71_RS33760 0.34 +1.1 895,201 + QEN71_RS33760 0.38 -0.2 895,202 - QEN71_RS33760 0.38 -0.8 895,257 + QEN71_RS33760 0.47 -1.1 895,348 + QEN71_RS33760 0.60 -0.5 895,540 - QEN71_RS33760 0.90 -0.2 895,540 - QEN71_RS33760 0.90 -0.2 895,540 - QEN71_RS33760 0.90 -0.7 895,603 + -0.5 895,603 + +1.4 895,603 + -1.1 895,604 - -0.6 895,604 - +0.1 895,660 + -0.3 895,660 + -1.3 895,757 + QEN71_RS33765 0.21 +0.6 895,757 - QEN71_RS33765 0.21 +0.8 895,757 - QEN71_RS33765 0.21 -0.7 896,016 - QEN71_RS33765 0.56 -0.5 896,176 + QEN71_RS33765 0.78 -1.4 896,177 - QEN71_RS33765 0.78 +1.8 896,258 - QEN71_RS33765 0.89 +0.4 896,258 - QEN71_RS33765 0.89 -1.8 896,367 + -0.2 896,367 + +0.0 896,367 + -1.5 896,367 + +0.6 896,368 - -0.1 896,369 + -1.1 896,370 - -0.7 896,371 + +0.3
Or see this region's nucleotide sequence