Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS16645

Experiment: Filtered_supernatant_MT183_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Filtered_supernatant_MT183_in_LB
3,687,874	-				-1.2
3,687,874	-				-1.2
3,687,905	+				+1.4
3,687,905	+				-1.3
3,687,905	+				-1.3
3,687,905	+				-0.7
3,687,906	-				-0.3
3,688,073	+		QEN71_RS16640	0.31	+1.5
3,688,073	+		QEN71_RS16640	0.31	+0.4
3,688,073	+		QEN71_RS16640	0.31	-0.2
3,688,073	+		QEN71_RS16640	0.31	+1.0
3,688,073	+		QEN71_RS16640	0.31	+1.2
3,688,073	+		QEN71_RS16640	0.31	-0.6
3,688,074	-		QEN71_RS16640	0.31	-0.8
3,688,074	-		QEN71_RS16640	0.31	-0.5
3,688,074	-		QEN71_RS16640	0.31	-0.3
3,688,074	-		QEN71_RS16640	0.31	+0.1
3,688,074	-		QEN71_RS16640	0.31	-0.5
3,688,074	-		QEN71_RS16640	0.31	-1.0
3,688,113	+		QEN71_RS16640	0.38	-0.9
3,688,152	-		QEN71_RS16640	0.44	-1.2
3,688,152	-		QEN71_RS16640	0.44	-0.8
3,688,152	-		QEN71_RS16640	0.44	+0.1
3,688,375	+		QEN71_RS16640	0.82	-1.2
3,688,375	+		QEN71_RS16640	0.82	-0.0
3,688,375	+		QEN71_RS16640	0.82	-1.0
3,688,375	+		QEN71_RS16640	0.82	-1.5
3,688,376	-		QEN71_RS16640	0.82	-0.2
3,688,376	-		QEN71_RS16640	0.82	+1.5
3,688,376	-		QEN71_RS16640	0.82	-0.2
3,688,492	+				+1.3
3,688,493	-				-1.2
3,688,511	+				+0.1
3,688,520	+				-0.2
3,688,661	+				-0.2
3,688,662	-				-0.5
3,688,887	+		QEN71_RS16645	0.10	+0.5
3,688,920	+		QEN71_RS16645	0.12	-0.7
3,688,920	+		QEN71_RS16645	0.12	-0.4
3,688,920	+		QEN71_RS16645	0.12	+1.2
3,688,921	-		QEN71_RS16645	0.12	-0.6
3,688,921	-		QEN71_RS16645	0.12	+0.8
3,689,088	+		QEN71_RS16645	0.19	+0.4
3,689,088	+		QEN71_RS16645	0.19	-0.3
3,689,088	+		QEN71_RS16645	0.19	-1.2
3,689,089	-		QEN71_RS16645	0.19	+0.4
3,689,089	-		QEN71_RS16645	0.19	-2.3
3,689,142	+		QEN71_RS16645	0.21	+1.4
3,689,143	-		QEN71_RS16645	0.21	-0.1
3,689,202	+		QEN71_RS16645	0.23	-1.0
3,689,202	+		QEN71_RS16645	0.23	-0.5
3,689,211	+		QEN71_RS16645	0.23	-0.7
3,689,211	+		QEN71_RS16645	0.23	-0.3
3,689,211	+		QEN71_RS16645	0.23	-0.3
3,689,211	+		QEN71_RS16645	0.23	-1.2
3,689,211	+		QEN71_RS16645	0.23	-0.8
3,689,212	-		QEN71_RS16645	0.24	-1.0
3,689,212	-		QEN71_RS16645	0.24	-1.2
3,689,212	-		QEN71_RS16645	0.24	+1.0
3,689,289	+		QEN71_RS16645	0.27	+0.1
3,689,289	+		QEN71_RS16645	0.27	-0.4
3,689,290	-		QEN71_RS16645	0.27	-0.2
3,689,370	-		QEN71_RS16645	0.30	-0.2
3,689,370	-		QEN71_RS16645	0.30	-1.8
3,689,370	-		QEN71_RS16645	0.30	-0.1
3,689,370	-		QEN71_RS16645	0.30	+0.3
3,689,562	+		QEN71_RS16645	0.38	+0.9
3,689,694	+		QEN71_RS16645	0.43	-0.3
3,689,694	+		QEN71_RS16645	0.43	-0.6
3,689,694	+		QEN71_RS16645	0.43	-0.4
3,689,694	+		QEN71_RS16645	0.43	-0.2
3,689,694	+		QEN71_RS16645	0.43	+0.7
3,689,694	+		QEN71_RS16645	0.43	+0.3
3,689,694	+		QEN71_RS16645	0.43	-0.3
3,689,694	+		QEN71_RS16645	0.43	+1.1
3,689,694	+		QEN71_RS16645	0.43	+0.8
3,689,694	+		QEN71_RS16645	0.43	+0.6
3,689,694	+		QEN71_RS16645	0.43	-0.1
3,689,694	+		QEN71_RS16645	0.43	-0.1
3,689,695	-		QEN71_RS16645	0.43	-0.4
3,689,695	-		QEN71_RS16645	0.43	+0.0
3,689,695	-		QEN71_RS16645	0.43	+1.1
3,689,695	-		QEN71_RS16645	0.43	+0.8
3,689,695	-		QEN71_RS16645	0.43	-0.6
3,689,695	-		QEN71_RS16645	0.43	-0.5
3,689,695	-		QEN71_RS16645	0.43	-0.5
3,689,695	-		QEN71_RS16645	0.43	-1.4
3,689,703	+		QEN71_RS16645	0.43	-0.1
3,689,703	+		QEN71_RS16645	0.43	-0.1
3,689,704	-		QEN71_RS16645	0.43	-0.8
3,689,704	-		QEN71_RS16645	0.43	+1.5
3,689,751	+		QEN71_RS16645	0.45	-0.5
3,689,790	+		QEN71_RS16645	0.47	+0.5
3,689,791	-		QEN71_RS16645	0.47	+0.4
3,689,809	+		QEN71_RS16645	0.47	+0.4
3,689,810	-		QEN71_RS16645	0.47	-0.8
3,689,810	-		QEN71_RS16645	0.47	-1.1
3,689,886	+		QEN71_RS16645	0.51	+0.2
3,689,886	+		QEN71_RS16645	0.51	-0.5
3,689,887	-		QEN71_RS16645	0.51	+0.2
3,689,887	-		QEN71_RS16645	0.51	-0.1
3,689,887	-		QEN71_RS16645	0.51	-1.6
3,689,887	-		QEN71_RS16645	0.51	-0.8
3,690,132	+		QEN71_RS16645	0.60	+0.8
3,690,132	+		QEN71_RS16645	0.60	+0.3
3,690,132	+		QEN71_RS16645	0.60	-1.6
3,690,132	+		QEN71_RS16645	0.60	-0.7
3,690,132	+		QEN71_RS16645	0.60	-1.3
3,690,133	-		QEN71_RS16645	0.60	-0.6
3,690,133	-		QEN71_RS16645	0.60	+0.1
3,690,133	-		QEN71_RS16645	0.60	+0.8
3,690,133	-		QEN71_RS16645	0.60	-0.9
3,690,133	-		QEN71_RS16645	0.60	+0.2
3,690,133	-		QEN71_RS16645	0.60	+0.2
3,690,133	-		QEN71_RS16645	0.60	+0.0
3,690,133	-		QEN71_RS16645	0.60	-0.2
3,690,133	-		QEN71_RS16645	0.60	+0.4
3,690,133	-		QEN71_RS16645	0.60	-1.5
3,690,134	+		QEN71_RS16645	0.60	-0.6
3,690,134	+		QEN71_RS16645	0.60	-0.2
3,690,135	-		QEN71_RS16645	0.61	-2.5
3,690,135	-		QEN71_RS16645	0.61	+1.4
3,690,135	-		QEN71_RS16645	0.61	-1.0
3,690,150	+		QEN71_RS16645	0.61	+1.0
3,690,150	+		QEN71_RS16645	0.61	-0.1
3,690,150	+		QEN71_RS16645	0.61	+0.6
3,690,150	+		QEN71_RS16645	0.61	+1.4
3,690,151	-		QEN71_RS16645	0.61	-0.2
3,690,168	+		QEN71_RS16645	0.62	-2.1
3,690,168	+		QEN71_RS16645	0.62	-0.4
3,690,168	+		QEN71_RS16645	0.62	-0.1
3,690,169	-		QEN71_RS16645	0.62	-1.1
3,690,502	-		QEN71_RS16645	0.75	-1.8
3,690,534	+		QEN71_RS16645	0.77	+0.3
3,690,534	+		QEN71_RS16645	0.77	+0.7
3,690,534	+		QEN71_RS16645	0.77	+0.6
3,690,535	-		QEN71_RS16645	0.77	-0.0
3,690,636	+		QEN71_RS16645	0.81	-0.5
3,690,636	+		QEN71_RS16645	0.81	+0.0
3,690,723	-		QEN71_RS16645	0.84	+0.2
3,691,378	+		QEN71_RS16650	0.61	-1.3
3,691,379	-		QEN71_RS16650	0.61	+0.1
3,691,379	-		QEN71_RS16650	0.61	-1.5
3,691,379	-		QEN71_RS16650	0.61	-1.8
3,691,418	-		QEN71_RS16650	0.71	+0.6
3,691,418	-		QEN71_RS16650	0.71	-1.2
3,691,495	+				+0.8
3,691,496	-				+0.1
3,691,505	-				-0.3
3,691,533	-				-0.5
3,691,533	-				-0.1
3,691,555	+				-2.1
3,691,555	+				-0.8
3,691,556	-				+0.7
3,691,631	+				-0.2
3,691,631	+				-0.4
3,691,632	-				-0.3
3,691,657	-				+0.6
3,691,657	-				+0.0
3,691,657	-				-0.4
3,691,686	-				+0.5
3,691,892	+		QEN71_RS16655	0.45	-1.0
3,691,893	-		QEN71_RS16655	0.45	+0.3
3,691,893	-		QEN71_RS16655	0.45	-0.6
3,691,893	-		QEN71_RS16655	0.45	-0.7
3,691,893	-		QEN71_RS16655	0.45	-0.3
3,691,893	-		QEN71_RS16655	0.45	-1.6
3,691,908	-		QEN71_RS16655	0.48	+0.2
3,692,108	+		QEN71_RS16655	0.83	-1.3