Experiment: Filtered_supernatant_MT183_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS02240 and QEN71_RS02245 are separated by 185 nucleotides QEN71_RS02245 and QEN71_RS02250 are separated by 381 nucleotides QEN71_RS02250 and QEN71_RS02255 are separated by 413 nucleotides
QEN71_RS02240: QEN71_RS02240 - hypothetical protein, at 504,206 to 504,595
_RS02240
QEN71_RS02245: QEN71_RS02245 - hypothetical protein, at 504,781 to 504,978
_RS02245
QEN71_RS02250: QEN71_RS02250 - DeoR/GlpR family DNA-binding transcription regulator, at 505,360 to 506,139
_RS02250
QEN71_RS02255: QEN71_RS02255 - ferritin-like domain-containing protein, at 506,553 to 507,380
_RS02255
Position (kb) 505
506
507 Strain fitness (log2 ratio) -2
-1
0
1
2 at 504.377 kb on + strand, within QEN71_RS02240 at 504.377 kb on + strand, within QEN71_RS02240 at 504.377 kb on + strand, within QEN71_RS02240 at 504.377 kb on + strand, within QEN71_RS02240 at 504.377 kb on + strand, within QEN71_RS02240 at 504.377 kb on + strand, within QEN71_RS02240 at 504.377 kb on + strand, within QEN71_RS02240 at 504.378 kb on - strand, within QEN71_RS02240 at 504.378 kb on - strand, within QEN71_RS02240 at 504.378 kb on - strand, within QEN71_RS02240 at 504.378 kb on - strand, within QEN71_RS02240 at 504.379 kb on + strand, within QEN71_RS02240 at 504.379 kb on + strand, within QEN71_RS02240 at 504.379 kb on + strand, within QEN71_RS02240 at 504.379 kb on + strand, within QEN71_RS02240 at 504.379 kb on + strand, within QEN71_RS02240 at 504.380 kb on - strand, within QEN71_RS02240 at 504.380 kb on - strand, within QEN71_RS02240 at 504.380 kb on - strand, within QEN71_RS02240 at 504.380 kb on - strand, within QEN71_RS02240 at 504.380 kb on - strand, within QEN71_RS02240 at 504.380 kb on - strand, within QEN71_RS02240 at 504.380 kb on - strand, within QEN71_RS02240 at 504.398 kb on + strand, within QEN71_RS02240 at 504.398 kb on + strand, within QEN71_RS02240 at 504.398 kb on + strand, within QEN71_RS02240 at 504.398 kb on + strand, within QEN71_RS02240 at 504.398 kb on + strand, within QEN71_RS02240 at 504.399 kb on - strand, within QEN71_RS02240 at 504.399 kb on - strand, within QEN71_RS02240 at 504.399 kb on - strand, within QEN71_RS02240 at 504.399 kb on - strand, within QEN71_RS02240 at 504.399 kb on - strand, within QEN71_RS02240 at 504.437 kb on + strand, within QEN71_RS02240 at 504.437 kb on + strand, within QEN71_RS02240 at 504.438 kb on - strand, within QEN71_RS02240 at 504.438 kb on - strand, within QEN71_RS02240 at 504.438 kb on - strand, within QEN71_RS02240 at 504.438 kb on - strand, within QEN71_RS02240 at 504.470 kb on + strand, within QEN71_RS02240 at 504.470 kb on + strand, within QEN71_RS02240 at 504.612 kb on + strand at 504.612 kb on + strand at 504.612 kb on + strand at 504.612 kb on + strand at 504.612 kb on + strand at 504.612 kb on + strand at 504.612 kb on + strand at 504.612 kb on + strand at 504.612 kb on + strand at 504.613 kb on - strand at 504.613 kb on - strand at 504.613 kb on - strand at 504.613 kb on - strand at 504.613 kb on - strand at 504.613 kb on - strand at 504.655 kb on + strand at 504.655 kb on + strand at 504.655 kb on + strand at 504.656 kb on - strand at 504.656 kb on - strand at 504.656 kb on - strand at 504.701 kb on + strand at 504.701 kb on + strand at 504.701 kb on + strand at 504.702 kb on - strand at 504.730 kb on + strand at 504.730 kb on + strand at 504.730 kb on + strand at 504.731 kb on - strand at 504.743 kb on + strand at 504.798 kb on + strand at 504.798 kb on + strand at 504.814 kb on - strand, within QEN71_RS02245 at 504.831 kb on + strand, within QEN71_RS02245 at 504.832 kb on - strand, within QEN71_RS02245 at 504.832 kb on - strand, within QEN71_RS02245 at 505.000 kb on + strand at 505.000 kb on + strand at 505.000 kb on + strand at 505.000 kb on + strand at 505.000 kb on + strand at 505.009 kb on - strand at 505.065 kb on - strand at 505.137 kb on + strand at 505.137 kb on + strand at 505.137 kb on + strand at 505.138 kb on - strand at 505.138 kb on - strand at 505.161 kb on + strand at 505.161 kb on + strand at 505.161 kb on + strand at 505.161 kb on + strand at 505.161 kb on + strand at 505.161 kb on + strand at 505.161 kb on + strand at 505.161 kb on + strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.162 kb on - strand at 505.216 kb on + strand at 505.353 kb on + strand at 505.353 kb on + strand at 505.353 kb on + strand at 505.354 kb on - strand at 505.354 kb on - strand at 505.354 kb on - strand at 505.354 kb on - strand at 505.373 kb on + strand at 505.373 kb on + strand at 505.373 kb on + strand at 505.373 kb on + strand at 505.373 kb on + strand at 505.373 kb on + strand at 505.374 kb on - strand at 505.374 kb on - strand at 505.374 kb on - strand at 505.374 kb on - strand at 505.374 kb on - strand at 505.374 kb on - strand at 505.922 kb on + strand, within QEN71_RS02250 at 505.923 kb on - strand, within QEN71_RS02250 at 505.923 kb on - strand, within QEN71_RS02250 at 505.923 kb on - strand, within QEN71_RS02250 at 506.164 kb on + strand at 506.164 kb on + strand at 506.164 kb on + strand at 506.164 kb on + strand at 506.164 kb on + strand at 506.164 kb on + strand at 506.164 kb on + strand at 506.165 kb on - strand at 506.165 kb on - strand at 506.165 kb on - strand at 506.165 kb on - strand at 506.195 kb on + strand at 506.195 kb on + strand at 506.195 kb on + strand at 506.195 kb on + strand at 506.195 kb on + strand at 506.195 kb on + strand at 506.195 kb on + strand at 506.195 kb on + strand at 506.195 kb on + strand at 506.195 kb on + strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.196 kb on - strand at 506.276 kb on + strand at 506.276 kb on + strand at 506.276 kb on + strand at 506.276 kb on + strand at 506.276 kb on + strand at 506.276 kb on + strand at 506.276 kb on + strand at 506.276 kb on + strand at 506.276 kb on + strand at 506.277 kb on - strand at 506.277 kb on - strand at 506.277 kb on - strand at 506.287 kb on + strand at 506.288 kb on - strand at 506.407 kb on + strand at 506.408 kb on - strand at 506.408 kb on - strand at 506.408 kb on - strand at 506.408 kb on - strand at 506.408 kb on - strand at 506.408 kb on - strand at 506.408 kb on - strand at 506.444 kb on + strand at 506.444 kb on + strand at 506.470 kb on + strand at 506.470 kb on + strand at 506.471 kb on - strand at 506.471 kb on - strand at 506.471 kb on - strand at 506.471 kb on - strand at 506.552 kb on + strand at 506.552 kb on + strand at 506.552 kb on + strand at 506.553 kb on - strand at 506.598 kb on - strand at 506.688 kb on - strand, within QEN71_RS02255 at 506.697 kb on + strand, within QEN71_RS02255 at 506.697 kb on + strand, within QEN71_RS02255 at 506.697 kb on + strand, within QEN71_RS02255 at 506.697 kb on + strand, within QEN71_RS02255 at 506.697 kb on + strand, within QEN71_RS02255 at 506.698 kb on - strand, within QEN71_RS02255 at 506.698 kb on - strand, within QEN71_RS02255 at 506.698 kb on - strand, within QEN71_RS02255 at 506.698 kb on - strand, within QEN71_RS02255 at 506.805 kb on + strand, within QEN71_RS02255 at 506.805 kb on + strand, within QEN71_RS02255 at 506.806 kb on - strand, within QEN71_RS02255 at 506.806 kb on - strand, within QEN71_RS02255 at 506.806 kb on - strand, within QEN71_RS02255 at 506.806 kb on - strand, within QEN71_RS02255 at 506.806 kb on - strand, within QEN71_RS02255 at 506.868 kb on + strand, within QEN71_RS02255 at 506.869 kb on - strand, within QEN71_RS02255 at 506.869 kb on - strand, within QEN71_RS02255 at 506.961 kb on + strand, within QEN71_RS02255 at 506.961 kb on + strand, within QEN71_RS02255 at 506.961 kb on + strand, within QEN71_RS02255 at 506.962 kb on - strand, within QEN71_RS02255 at 506.977 kb on + strand, within QEN71_RS02255 at 506.977 kb on + strand, within QEN71_RS02255 at 506.977 kb on + strand, within QEN71_RS02255 at 506.977 kb on + strand, within QEN71_RS02255 at 506.977 kb on + strand, within QEN71_RS02255 at 506.977 kb on + strand, within QEN71_RS02255 at 506.977 kb on + strand, within QEN71_RS02255 at 506.978 kb on - strand, within QEN71_RS02255 at 506.978 kb on - strand, within QEN71_RS02255 at 506.978 kb on - strand, within QEN71_RS02255 at 506.978 kb on - strand, within QEN71_RS02255 at 507.042 kb on + strand, within QEN71_RS02255 at 507.042 kb on + strand, within QEN71_RS02255 at 507.042 kb on + strand, within QEN71_RS02255 at 507.042 kb on + strand, within QEN71_RS02255 at 507.042 kb on + strand, within QEN71_RS02255 at 507.042 kb on + strand, within QEN71_RS02255 at 507.043 kb on - strand, within QEN71_RS02255 at 507.043 kb on - strand, within QEN71_RS02255 at 507.043 kb on - strand, within QEN71_RS02255 at 507.060 kb on + strand, within QEN71_RS02255 at 507.060 kb on + strand, within QEN71_RS02255 at 507.061 kb on - strand, within QEN71_RS02255 at 507.061 kb on - strand, within QEN71_RS02255 at 507.061 kb on - strand, within QEN71_RS02255 at 507.072 kb on + strand, within QEN71_RS02255 at 507.072 kb on + strand, within QEN71_RS02255 at 507.072 kb on + strand, within QEN71_RS02255 at 507.072 kb on + strand, within QEN71_RS02255 at 507.073 kb on - strand, within QEN71_RS02255 at 507.073 kb on - strand, within QEN71_RS02255 at 507.073 kb on - strand, within QEN71_RS02255
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT183_in_LB remove 504,377 + QEN71_RS02240 0.44 +0.9 504,377 + QEN71_RS02240 0.44 +0.7 504,377 + QEN71_RS02240 0.44 +0.3 504,377 + QEN71_RS02240 0.44 -0.6 504,377 + QEN71_RS02240 0.44 +0.2 504,377 + QEN71_RS02240 0.44 -0.2 504,377 + QEN71_RS02240 0.44 -0.3 504,378 - QEN71_RS02240 0.44 +0.7 504,378 - QEN71_RS02240 0.44 +0.0 504,378 - QEN71_RS02240 0.44 -0.5 504,378 - QEN71_RS02240 0.44 -0.0 504,379 + QEN71_RS02240 0.44 -0.7 504,379 + QEN71_RS02240 0.44 +0.4 504,379 + QEN71_RS02240 0.44 -0.3 504,379 + QEN71_RS02240 0.44 +0.0 504,379 + QEN71_RS02240 0.44 +0.2 504,380 - QEN71_RS02240 0.45 -0.6 504,380 - QEN71_RS02240 0.45 +1.8 504,380 - QEN71_RS02240 0.45 -0.4 504,380 - QEN71_RS02240 0.45 -0.5 504,380 - QEN71_RS02240 0.45 +2.0 504,380 - QEN71_RS02240 0.45 -1.7 504,380 - QEN71_RS02240 0.45 -1.0 504,398 + QEN71_RS02240 0.49 +0.6 504,398 + QEN71_RS02240 0.49 +0.9 504,398 + QEN71_RS02240 0.49 -0.5 504,398 + QEN71_RS02240 0.49 +0.9 504,398 + QEN71_RS02240 0.49 +0.8 504,399 - QEN71_RS02240 0.49 -0.6 504,399 - QEN71_RS02240 0.49 -0.2 504,399 - QEN71_RS02240 0.49 +0.4 504,399 - QEN71_RS02240 0.49 +0.2 504,399 - QEN71_RS02240 0.49 -1.0 504,437 + QEN71_RS02240 0.59 +0.4 504,437 + QEN71_RS02240 0.59 +0.6 504,438 - QEN71_RS02240 0.59 -0.2 504,438 - QEN71_RS02240 0.59 -0.3 504,438 - QEN71_RS02240 0.59 +0.4 504,438 - QEN71_RS02240 0.59 -1.1 504,470 + QEN71_RS02240 0.68 +0.1 504,470 + QEN71_RS02240 0.68 +1.0 504,612 + +0.4 504,612 + -0.1 504,612 + -0.4 504,612 + -0.5 504,612 + -0.3 504,612 + +0.3 504,612 + +0.2 504,612 + -2.0 504,612 + +2.6 504,613 - -0.7 504,613 - +0.1 504,613 - +0.4 504,613 - -0.0 504,613 - -1.1 504,613 - +0.4 504,655 + -0.1 504,655 + +0.0 504,655 + +0.7 504,656 - -0.4 504,656 - +0.4 504,656 - +0.3 504,701 + -1.4 504,701 + -0.1 504,701 + -0.2 504,702 - +1.4 504,730 + +0.4 504,730 + -1.0 504,730 + -0.2 504,731 - +0.7 504,743 + +0.0 504,798 + -0.2 504,798 + -0.7 504,814 - QEN71_RS02245 0.17 +1.8 504,831 + QEN71_RS02245 0.25 -0.3 504,832 - QEN71_RS02245 0.26 -0.0 504,832 - QEN71_RS02245 0.26 -0.5 505,000 + -0.1 505,000 + +0.0 505,000 + -2.3 505,000 + -1.1 505,000 + -1.0 505,009 - +0.2 505,065 - +1.0 505,137 + +0.7 505,137 + +0.1 505,137 + +0.6 505,138 - -2.6 505,138 - +0.1 505,161 + +0.3 505,161 + +0.1 505,161 + +0.4 505,161 + +1.5 505,161 + -0.6 505,161 + +0.9 505,161 + +1.5 505,161 + -0.9 505,162 - -0.1 505,162 - -0.3 505,162 - +0.0 505,162 - +0.4 505,162 - +0.4 505,162 - +0.1 505,162 - -0.4 505,162 - -0.9 505,162 - -0.7 505,162 - -1.4 505,162 - -0.1 505,162 - -1.8 505,162 - +0.4 505,162 - +0.4 505,216 + +0.5 505,353 + -0.0 505,353 + +0.8 505,353 + +1.1 505,354 - -0.5 505,354 - -1.2 505,354 - +0.4 505,354 - -0.5 505,373 + +0.8 505,373 + +0.3 505,373 + -0.5 505,373 + +1.3 505,373 + -0.3 505,373 + +0.3 505,374 - -1.5 505,374 - -0.1 505,374 - +0.6 505,374 - +1.0 505,374 - +1.1 505,374 - -1.2 505,922 + QEN71_RS02250 0.72 +0.4 505,923 - QEN71_RS02250 0.72 +0.4 505,923 - QEN71_RS02250 0.72 -0.3 505,923 - QEN71_RS02250 0.72 +1.1 506,164 + -0.1 506,164 + -0.6 506,164 + -1.4 506,164 + +0.1 506,164 + -0.8 506,164 + -0.8 506,164 + +0.1 506,165 - -0.9 506,165 - +1.0 506,165 - +0.3 506,165 - +0.3 506,195 + +0.7 506,195 + +0.4 506,195 + -0.6 506,195 + +0.0 506,195 + +0.8 506,195 + +0.0 506,195 + -0.4 506,195 + +1.0 506,195 + +0.0 506,195 + -0.2 506,196 - -0.5 506,196 - -1.9 506,196 - -1.7 506,196 - +2.0 506,196 - -0.2 506,196 - +0.5 506,196 - +0.5 506,196 - +0.4 506,196 - -0.3 506,196 - -0.6 506,196 - +0.4 506,196 - +0.0 506,196 - +1.0 506,196 - +0.3 506,196 - -0.3 506,276 + -1.3 506,276 + -0.8 506,276 + +0.2 506,276 + -0.1 506,276 + +1.3 506,276 + -1.1 506,276 + +0.2 506,276 + -0.6 506,276 + +0.6 506,277 - +0.6 506,277 - -0.6 506,277 - +0.0 506,287 + -0.3 506,288 - +0.7 506,407 + -0.6 506,408 - +1.8 506,408 - -0.7 506,408 - -0.7 506,408 - -0.3 506,408 - -0.4 506,408 - -0.4 506,408 - -1.1 506,444 + +0.7 506,444 + +0.2 506,470 + +1.0 506,470 + +0.7 506,471 - -0.6 506,471 - -1.0 506,471 - -0.8 506,471 - +1.4 506,552 + -0.5 506,552 + -2.3 506,552 + -0.3 506,553 - -0.2 506,598 - -0.0 506,688 - QEN71_RS02255 0.16 -0.4 506,697 + QEN71_RS02255 0.17 +0.4 506,697 + QEN71_RS02255 0.17 +0.4 506,697 + QEN71_RS02255 0.17 -0.3 506,697 + QEN71_RS02255 0.17 -0.6 506,697 + QEN71_RS02255 0.17 -0.8 506,698 - QEN71_RS02255 0.18 +0.0 506,698 - QEN71_RS02255 0.18 -0.8 506,698 - QEN71_RS02255 0.18 -0.5 506,698 - QEN71_RS02255 0.18 -0.3 506,805 + QEN71_RS02255 0.30 -2.7 506,805 + QEN71_RS02255 0.30 -0.4 506,806 - QEN71_RS02255 0.31 -1.6 506,806 - QEN71_RS02255 0.31 -0.7 506,806 - QEN71_RS02255 0.31 +0.8 506,806 - QEN71_RS02255 0.31 -0.6 506,806 - QEN71_RS02255 0.31 -1.2 506,868 + QEN71_RS02255 0.38 +0.4 506,869 - QEN71_RS02255 0.38 -0.5 506,869 - QEN71_RS02255 0.38 -0.7 506,961 + QEN71_RS02255 0.49 -0.5 506,961 + QEN71_RS02255 0.49 -0.2 506,961 + QEN71_RS02255 0.49 -0.1 506,962 - QEN71_RS02255 0.49 +1.1 506,977 + QEN71_RS02255 0.51 -0.4 506,977 + QEN71_RS02255 0.51 -0.3 506,977 + QEN71_RS02255 0.51 +1.5 506,977 + QEN71_RS02255 0.51 +0.8 506,977 + QEN71_RS02255 0.51 -0.7 506,977 + QEN71_RS02255 0.51 -0.2 506,977 + QEN71_RS02255 0.51 -0.3 506,978 - QEN71_RS02255 0.51 +1.3 506,978 - QEN71_RS02255 0.51 -0.5 506,978 - QEN71_RS02255 0.51 -0.4 506,978 - QEN71_RS02255 0.51 -0.6 507,042 + QEN71_RS02255 0.59 -0.5 507,042 + QEN71_RS02255 0.59 -0.2 507,042 + QEN71_RS02255 0.59 -0.5 507,042 + QEN71_RS02255 0.59 +1.5 507,042 + QEN71_RS02255 0.59 -1.8 507,042 + QEN71_RS02255 0.59 -0.4 507,043 - QEN71_RS02255 0.59 -0.8 507,043 - QEN71_RS02255 0.59 -0.3 507,043 - QEN71_RS02255 0.59 -0.5 507,060 + QEN71_RS02255 0.61 +0.8 507,060 + QEN71_RS02255 0.61 -0.4 507,061 - QEN71_RS02255 0.61 +0.1 507,061 - QEN71_RS02255 0.61 -0.5 507,061 - QEN71_RS02255 0.61 +1.2 507,072 + QEN71_RS02255 0.63 +0.9 507,072 + QEN71_RS02255 0.63 -0.4 507,072 + QEN71_RS02255 0.63 -1.0 507,072 + QEN71_RS02255 0.63 +0.1 507,073 - QEN71_RS02255 0.63 -0.0 507,073 - QEN71_RS02255 0.63 -0.2 507,073 - QEN71_RS02255 0.63 -0.5
Or see this region's nucleotide sequence