Experiment: Filtered_supernatant_MT71_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS07725 and QEN71_RS07730 are separated by 84 nucleotides QEN71_RS07730 and QEN71_RS07735 are separated by 15 nucleotides QEN71_RS07735 and QEN71_RS07740 are separated by 21 nucleotides
QEN71_RS07725: QEN71_RS07725 - transporter substrate-binding domain-containing protein, at 1,713,371 to 1,714,213
_RS07725
QEN71_RS07730: QEN71_RS07730 - ABC transporter permease subunit, at 1,714,298 to 1,715,020
_RS07730
QEN71_RS07735: QEN71_RS07735 - ABC transporter permease subunit, at 1,715,036 to 1,715,788
_RS07735
QEN71_RS07740: QEN71_RS07740 - ATP-binding cassette domain-containing protein, at 1,715,810 to 1,716,601
_RS07740
Position (kb) 1714
1715
1716 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1713.370 kb on + strand at 1713.370 kb on + strand at 1713.370 kb on + strand at 1713.371 kb on - strand at 1713.371 kb on - strand at 1713.371 kb on - strand at 1713.384 kb on + strand at 1713.699 kb on - strand, within QEN71_RS07725 at 1713.924 kb on - strand, within QEN71_RS07725 at 1713.998 kb on + strand, within QEN71_RS07725 at 1713.999 kb on - strand, within QEN71_RS07725 at 1714.169 kb on - strand at 1714.225 kb on - strand at 1714.292 kb on + strand at 1714.293 kb on - strand at 1714.293 kb on - strand at 1714.478 kb on + strand, within QEN71_RS07730 at 1714.520 kb on + strand, within QEN71_RS07730 at 1714.520 kb on + strand, within QEN71_RS07730 at 1714.520 kb on + strand, within QEN71_RS07730 at 1714.521 kb on - strand, within QEN71_RS07730 at 1714.521 kb on - strand, within QEN71_RS07730 at 1714.529 kb on + strand, within QEN71_RS07730 at 1714.646 kb on + strand, within QEN71_RS07730 at 1714.661 kb on + strand, within QEN71_RS07730 at 1714.661 kb on + strand, within QEN71_RS07730 at 1714.662 kb on - strand, within QEN71_RS07730 at 1714.895 kb on + strand, within QEN71_RS07730 at 1714.929 kb on - strand, within QEN71_RS07730 at 1714.929 kb on - strand, within QEN71_RS07730 at 1715.207 kb on + strand, within QEN71_RS07735 at 1715.208 kb on - strand, within QEN71_RS07735 at 1715.324 kb on + strand, within QEN71_RS07735 at 1715.324 kb on + strand, within QEN71_RS07735 at 1715.325 kb on - strand, within QEN71_RS07735 at 1715.325 kb on - strand, within QEN71_RS07735 at 1715.325 kb on - strand, within QEN71_RS07735 at 1715.325 kb on - strand, within QEN71_RS07735 at 1715.356 kb on + strand, within QEN71_RS07735 at 1715.356 kb on + strand, within QEN71_RS07735 at 1715.367 kb on - strand, within QEN71_RS07735 at 1715.609 kb on + strand, within QEN71_RS07735 at 1715.610 kb on - strand, within QEN71_RS07735 at 1715.610 kb on - strand, within QEN71_RS07735 at 1715.649 kb on - strand, within QEN71_RS07735 at 1715.649 kb on - strand, within QEN71_RS07735
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT71_in_LB remove 1,713,370 + +0.4 1,713,370 + +0.1 1,713,370 + -0.1 1,713,371 - -0.8 1,713,371 - -0.0 1,713,371 - +0.4 1,713,384 + -1.4 1,713,699 - QEN71_RS07725 0.39 -0.4 1,713,924 - QEN71_RS07725 0.66 -0.5 1,713,998 + QEN71_RS07725 0.74 +0.9 1,713,999 - QEN71_RS07725 0.74 +0.7 1,714,169 - -0.9 1,714,225 - -0.2 1,714,292 + -0.2 1,714,293 - -0.5 1,714,293 - +0.0 1,714,478 + QEN71_RS07730 0.25 -0.9 1,714,520 + QEN71_RS07730 0.31 +2.5 1,714,520 + QEN71_RS07730 0.31 -0.8 1,714,520 + QEN71_RS07730 0.31 -0.1 1,714,521 - QEN71_RS07730 0.31 +0.0 1,714,521 - QEN71_RS07730 0.31 -0.6 1,714,529 + QEN71_RS07730 0.32 +1.0 1,714,646 + QEN71_RS07730 0.48 +0.3 1,714,661 + QEN71_RS07730 0.50 +0.7 1,714,661 + QEN71_RS07730 0.50 -1.0 1,714,662 - QEN71_RS07730 0.50 +0.6 1,714,895 + QEN71_RS07730 0.83 -1.4 1,714,929 - QEN71_RS07730 0.87 +1.9 1,714,929 - QEN71_RS07730 0.87 -1.0 1,715,207 + QEN71_RS07735 0.23 -2.0 1,715,208 - QEN71_RS07735 0.23 -0.2 1,715,324 + QEN71_RS07735 0.38 -0.4 1,715,324 + QEN71_RS07735 0.38 -0.2 1,715,325 - QEN71_RS07735 0.38 -0.2 1,715,325 - QEN71_RS07735 0.38 -0.5 1,715,325 - QEN71_RS07735 0.38 +2.0 1,715,325 - QEN71_RS07735 0.38 -0.3 1,715,356 + QEN71_RS07735 0.42 -1.2 1,715,356 + QEN71_RS07735 0.42 -0.0 1,715,367 - QEN71_RS07735 0.44 +0.5 1,715,609 + QEN71_RS07735 0.76 +0.5 1,715,610 - QEN71_RS07735 0.76 +0.3 1,715,610 - QEN71_RS07735 0.76 +1.5 1,715,649 - QEN71_RS07735 0.81 +0.1 1,715,649 - QEN71_RS07735 0.81 +0.4
Or see this region's nucleotide sequence