Experiment: Filtered_supernatant_MT71_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS01020 and QEN71_RS01025 are separated by 273 nucleotides QEN71_RS01025 and QEN71_RS01030 are separated by 27 nucleotides QEN71_RS01030 and QEN71_RS01035 are separated by 113 nucleotides
QEN71_RS01020: QEN71_RS01020 - nitronate monooxygenase family protein, at 235,774 to 236,733
_RS01020
QEN71_RS01025: QEN71_RS01025 - alpha/beta hydrolase, at 237,007 to 237,897
_RS01025
QEN71_RS01030: QEN71_RS01030 - Lrp/AsnC family transcriptional regulator, at 237,925 to 238,410
_RS01030
QEN71_RS01035: QEN71_RS01035 - DMT family transporter, at 238,524 to 239,432
_RS01035
Position (kb) 237
238 Strain fitness (log2 ratio) -2
-1
0
1
2 at 236.034 kb on - strand, within QEN71_RS01020 at 236.034 kb on - strand, within QEN71_RS01020 at 236.034 kb on - strand, within QEN71_RS01020 at 236.075 kb on + strand, within QEN71_RS01020 at 236.075 kb on + strand, within QEN71_RS01020 at 236.076 kb on - strand, within QEN71_RS01020 at 236.076 kb on - strand, within QEN71_RS01020 at 236.076 kb on - strand, within QEN71_RS01020 at 236.076 kb on - strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.126 kb on + strand, within QEN71_RS01020 at 236.127 kb on - strand, within QEN71_RS01020 at 236.127 kb on - strand, within QEN71_RS01020 at 236.127 kb on - strand, within QEN71_RS01020 at 236.127 kb on - strand, within QEN71_RS01020 at 236.127 kb on - strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.366 kb on + strand, within QEN71_RS01020 at 236.367 kb on - strand, within QEN71_RS01020 at 236.367 kb on - strand, within QEN71_RS01020 at 236.367 kb on - strand, within QEN71_RS01020 at 236.367 kb on - strand, within QEN71_RS01020 at 236.367 kb on - strand, within QEN71_RS01020 at 236.367 kb on - strand, within QEN71_RS01020 at 236.367 kb on - strand, within QEN71_RS01020 at 236.766 kb on + strand at 236.766 kb on + strand at 236.766 kb on + strand at 236.766 kb on + strand at 236.766 kb on + strand at 236.766 kb on + strand at 236.766 kb on + strand at 236.767 kb on - strand at 236.767 kb on - strand at 236.767 kb on - strand at 236.782 kb on + strand at 236.782 kb on + strand at 236.783 kb on - strand at 236.783 kb on - strand at 236.790 kb on + strand at 236.790 kb on + strand at 236.790 kb on + strand at 236.791 kb on - strand at 236.925 kb on + strand at 236.926 kb on - strand at 236.926 kb on - strand at 236.926 kb on - strand at 236.970 kb on + strand at 236.970 kb on + strand at 236.970 kb on + strand at 236.970 kb on + strand at 236.970 kb on + strand at 236.970 kb on + strand at 236.970 kb on + strand at 236.970 kb on + strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.971 kb on - strand at 236.985 kb on + strand at 236.985 kb on + strand at 236.985 kb on + strand at 236.985 kb on + strand at 236.985 kb on + strand at 236.985 kb on + strand at 236.985 kb on + strand at 236.985 kb on + strand at 236.985 kb on + strand at 236.986 kb on - strand at 236.986 kb on - strand at 236.986 kb on - strand at 236.986 kb on - strand at 237.057 kb on + strand at 237.058 kb on - strand at 237.058 kb on - strand at 237.193 kb on + strand, within QEN71_RS01025 at 237.194 kb on - strand, within QEN71_RS01025 at 237.239 kb on - strand, within QEN71_RS01025 at 237.394 kb on - strand, within QEN71_RS01025 at 237.415 kb on + strand, within QEN71_RS01025 at 237.415 kb on + strand, within QEN71_RS01025 at 237.415 kb on + strand, within QEN71_RS01025 at 237.416 kb on - strand, within QEN71_RS01025 at 237.416 kb on - strand, within QEN71_RS01025 at 237.416 kb on - strand, within QEN71_RS01025 at 237.416 kb on - strand, within QEN71_RS01025 at 237.448 kb on + strand, within QEN71_RS01025 at 237.448 kb on + strand, within QEN71_RS01025 at 237.448 kb on + strand, within QEN71_RS01025 at 237.448 kb on + strand, within QEN71_RS01025 at 237.449 kb on - strand, within QEN71_RS01025 at 237.520 kb on + strand, within QEN71_RS01025 at 237.520 kb on + strand, within QEN71_RS01025 at 237.520 kb on + strand, within QEN71_RS01025 at 237.520 kb on + strand, within QEN71_RS01025 at 237.520 kb on + strand, within QEN71_RS01025 at 237.521 kb on - strand, within QEN71_RS01025 at 237.521 kb on - strand, within QEN71_RS01025 at 237.521 kb on - strand, within QEN71_RS01025 at 237.521 kb on - strand, within QEN71_RS01025 at 237.521 kb on - strand, within QEN71_RS01025 at 237.589 kb on + strand, within QEN71_RS01025 at 237.589 kb on + strand, within QEN71_RS01025 at 237.640 kb on + strand, within QEN71_RS01025 at 237.640 kb on + strand, within QEN71_RS01025 at 237.826 kb on + strand at 237.826 kb on + strand at 237.826 kb on + strand at 237.826 kb on + strand at 237.826 kb on + strand at 237.826 kb on + strand at 237.826 kb on + strand at 237.827 kb on - strand at 237.827 kb on - strand at 237.827 kb on - strand at 237.827 kb on - strand at 237.827 kb on - strand at 237.827 kb on - strand at 237.827 kb on - strand at 238.043 kb on + strand, within QEN71_RS01030 at 238.043 kb on + strand, within QEN71_RS01030 at 238.044 kb on - strand, within QEN71_RS01030 at 238.179 kb on - strand, within QEN71_RS01030 at 238.426 kb on + strand at 238.451 kb on - strand at 238.455 kb on + strand at 238.456 kb on - strand at 238.459 kb on + strand at 238.459 kb on + strand at 238.459 kb on + strand at 238.460 kb on - strand at 238.460 kb on - strand at 238.460 kb on - strand at 238.463 kb on + strand at 238.463 kb on + strand at 238.463 kb on + strand at 238.463 kb on + strand at 238.463 kb on + strand at 238.463 kb on + strand at 238.463 kb on + strand at 238.464 kb on - strand at 238.464 kb on - strand at 238.464 kb on - strand at 238.464 kb on - strand at 238.464 kb on - strand at 238.484 kb on + strand at 238.484 kb on + strand at 238.484 kb on + strand at 238.485 kb on - strand at 238.485 kb on - strand at 238.485 kb on - strand at 238.485 kb on - strand at 238.552 kb on + strand at 238.553 kb on - strand at 238.553 kb on - strand at 238.553 kb on - strand at 238.553 kb on - strand at 238.618 kb on + strand, within QEN71_RS01035 at 238.619 kb on - strand, within QEN71_RS01035 at 238.803 kb on + strand, within QEN71_RS01035 at 238.803 kb on + strand, within QEN71_RS01035 at 238.803 kb on + strand, within QEN71_RS01035 at 238.839 kb on + strand, within QEN71_RS01035 at 238.839 kb on + strand, within QEN71_RS01035 at 238.840 kb on - strand, within QEN71_RS01035 at 238.840 kb on - strand, within QEN71_RS01035 at 238.840 kb on - strand, within QEN71_RS01035 at 238.844 kb on + strand, within QEN71_RS01035 at 238.844 kb on + strand, within QEN71_RS01035 at 238.844 kb on + strand, within QEN71_RS01035 at 238.845 kb on - strand, within QEN71_RS01035 at 238.845 kb on - strand, within QEN71_RS01035 at 238.845 kb on - strand, within QEN71_RS01035
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT71_in_LB remove 236,034 - QEN71_RS01020 0.27 -0.7 236,034 - QEN71_RS01020 0.27 -1.0 236,034 - QEN71_RS01020 0.27 -0.7 236,075 + QEN71_RS01020 0.31 -0.8 236,075 + QEN71_RS01020 0.31 +1.2 236,076 - QEN71_RS01020 0.31 +0.0 236,076 - QEN71_RS01020 0.31 -0.7 236,076 - QEN71_RS01020 0.31 -0.4 236,076 - QEN71_RS01020 0.31 -1.4 236,126 + QEN71_RS01020 0.37 +0.7 236,126 + QEN71_RS01020 0.37 +1.2 236,126 + QEN71_RS01020 0.37 +0.1 236,126 + QEN71_RS01020 0.37 +0.3 236,126 + QEN71_RS01020 0.37 -0.0 236,126 + QEN71_RS01020 0.37 +0.0 236,126 + QEN71_RS01020 0.37 -0.4 236,126 + QEN71_RS01020 0.37 +1.3 236,126 + QEN71_RS01020 0.37 -1.0 236,126 + QEN71_RS01020 0.37 +0.3 236,126 + QEN71_RS01020 0.37 -1.5 236,127 - QEN71_RS01020 0.37 +0.4 236,127 - QEN71_RS01020 0.37 -0.6 236,127 - QEN71_RS01020 0.37 -0.2 236,127 - QEN71_RS01020 0.37 +0.8 236,127 - QEN71_RS01020 0.37 -0.1 236,366 + QEN71_RS01020 0.62 -0.2 236,366 + QEN71_RS01020 0.62 -1.1 236,366 + QEN71_RS01020 0.62 +1.4 236,366 + QEN71_RS01020 0.62 +0.0 236,366 + QEN71_RS01020 0.62 +0.8 236,366 + QEN71_RS01020 0.62 +1.1 236,366 + QEN71_RS01020 0.62 +0.7 236,366 + QEN71_RS01020 0.62 +0.4 236,366 + QEN71_RS01020 0.62 +0.3 236,366 + QEN71_RS01020 0.62 +0.6 236,366 + QEN71_RS01020 0.62 -0.3 236,366 + QEN71_RS01020 0.62 -1.3 236,366 + QEN71_RS01020 0.62 +0.8 236,366 + QEN71_RS01020 0.62 -0.1 236,366 + QEN71_RS01020 0.62 -0.5 236,367 - QEN71_RS01020 0.62 -1.0 236,367 - QEN71_RS01020 0.62 +0.2 236,367 - QEN71_RS01020 0.62 -1.3 236,367 - QEN71_RS01020 0.62 +0.4 236,367 - QEN71_RS01020 0.62 -0.7 236,367 - QEN71_RS01020 0.62 +0.3 236,367 - QEN71_RS01020 0.62 +0.3 236,766 + -0.2 236,766 + -0.1 236,766 + +0.5 236,766 + -0.9 236,766 + -0.8 236,766 + +0.5 236,766 + +0.0 236,767 - +0.3 236,767 - -1.2 236,767 - -0.1 236,782 + -0.2 236,782 + -1.1 236,783 - +1.7 236,783 - -0.3 236,790 + +0.6 236,790 + -0.1 236,790 + -0.2 236,791 - -0.0 236,925 + -0.1 236,926 - +0.2 236,926 - -1.1 236,926 - -1.0 236,970 + -0.1 236,970 + +0.2 236,970 + -0.4 236,970 + +0.1 236,970 + +0.2 236,970 + +0.6 236,970 + +0.4 236,970 + -1.4 236,971 - -1.3 236,971 - -0.4 236,971 - -0.2 236,971 - -0.6 236,971 - +0.4 236,971 - +0.5 236,971 - -0.2 236,971 - -0.6 236,971 - +0.0 236,971 - -0.6 236,971 - -0.8 236,971 - -1.1 236,971 - +0.9 236,985 + -1.2 236,985 + +0.8 236,985 + +0.3 236,985 + -0.7 236,985 + -0.1 236,985 + -0.8 236,985 + +0.2 236,985 + +0.4 236,985 + +0.5 236,986 - -0.3 236,986 - -0.7 236,986 - -0.8 236,986 - +1.3 237,057 + -0.5 237,058 - -0.1 237,058 - +0.4 237,193 + QEN71_RS01025 0.21 +0.2 237,194 - QEN71_RS01025 0.21 +0.0 237,239 - QEN71_RS01025 0.26 +0.3 237,394 - QEN71_RS01025 0.43 -1.0 237,415 + QEN71_RS01025 0.46 -0.6 237,415 + QEN71_RS01025 0.46 -1.1 237,415 + QEN71_RS01025 0.46 -1.0 237,416 - QEN71_RS01025 0.46 -0.1 237,416 - QEN71_RS01025 0.46 +0.1 237,416 - QEN71_RS01025 0.46 +0.9 237,416 - QEN71_RS01025 0.46 -0.4 237,448 + QEN71_RS01025 0.49 -0.7 237,448 + QEN71_RS01025 0.49 -0.8 237,448 + QEN71_RS01025 0.49 +0.1 237,448 + QEN71_RS01025 0.49 +1.3 237,449 - QEN71_RS01025 0.50 -0.1 237,520 + QEN71_RS01025 0.58 +0.1 237,520 + QEN71_RS01025 0.58 +0.8 237,520 + QEN71_RS01025 0.58 +0.6 237,520 + QEN71_RS01025 0.58 -0.5 237,520 + QEN71_RS01025 0.58 -0.9 237,521 - QEN71_RS01025 0.58 +0.4 237,521 - QEN71_RS01025 0.58 -2.1 237,521 - QEN71_RS01025 0.58 -0.5 237,521 - QEN71_RS01025 0.58 +0.8 237,521 - QEN71_RS01025 0.58 -0.6 237,589 + QEN71_RS01025 0.65 -1.7 237,589 + QEN71_RS01025 0.65 +1.1 237,640 + QEN71_RS01025 0.71 -1.1 237,640 + QEN71_RS01025 0.71 -0.2 237,826 + -0.9 237,826 + +0.1 237,826 + +0.1 237,826 + +0.3 237,826 + +1.0 237,826 + -0.1 237,826 + +0.3 237,827 - +0.8 237,827 - -0.1 237,827 - -0.8 237,827 - -0.9 237,827 - -0.1 237,827 - +0.0 237,827 - -0.1 238,043 + QEN71_RS01030 0.24 +2.4 238,043 + QEN71_RS01030 0.24 -0.1 238,044 - QEN71_RS01030 0.24 +0.5 238,179 - QEN71_RS01030 0.52 +0.1 238,426 + +0.0 238,451 - +0.1 238,455 + +0.6 238,456 - +0.0 238,459 + -1.4 238,459 + +0.3 238,459 + -0.4 238,460 - +0.1 238,460 - -1.4 238,460 - -1.4 238,463 + -0.2 238,463 + +1.0 238,463 + -1.1 238,463 + -1.7 238,463 + +0.0 238,463 + +0.1 238,463 + -0.2 238,464 - -0.1 238,464 - +0.4 238,464 - +0.9 238,464 - -0.7 238,464 - -0.3 238,484 + -0.1 238,484 + +0.2 238,484 + -1.1 238,485 - +0.3 238,485 - -0.2 238,485 - +1.1 238,485 - -1.1 238,552 + -0.9 238,553 - +0.6 238,553 - +1.3 238,553 - -0.8 238,553 - +0.3 238,618 + QEN71_RS01035 0.10 -1.1 238,619 - QEN71_RS01035 0.10 -0.6 238,803 + QEN71_RS01035 0.31 +0.2 238,803 + QEN71_RS01035 0.31 +0.1 238,803 + QEN71_RS01035 0.31 +0.3 238,839 + QEN71_RS01035 0.35 +1.8 238,839 + QEN71_RS01035 0.35 -0.8 238,840 - QEN71_RS01035 0.35 -0.0 238,840 - QEN71_RS01035 0.35 -1.0 238,840 - QEN71_RS01035 0.35 -0.7 238,844 + QEN71_RS01035 0.35 +0.5 238,844 + QEN71_RS01035 0.35 +0.1 238,844 + QEN71_RS01035 0.35 -0.4 238,845 - QEN71_RS01035 0.35 +0.1 238,845 - QEN71_RS01035 0.35 -2.7 238,845 - QEN71_RS01035 0.35 +0.3
Or see this region's nucleotide sequence