Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04199

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
57,172	+		MIT1002_04197	0.83	-0.4
57,173	+		MIT1002_04197	0.84	-1.8
57,187	-		MIT1002_04197	0.88	-1.1
57,307	-				-0.0
57,326	-				-1.6
57,357	-				+0.1
57,373	+				-2.0
57,499	+				+2.6
57,499	+				-0.4
57,499	+				+0.5
57,513	-				+0.1
57,522	+				-1.6
57,533	-				-1.5
57,540	+				-0.9
57,548	-				-0.2
57,589	+				-2.2
57,595	-				+0.2
57,597	-				+1.0
57,597	-				+0.0
57,599	+				-1.4
57,641	-				-0.4
57,728	-				-1.0
57,776	-				+0.3
57,776	-				+0.1
57,792	+				+0.5
57,798	-				+1.0
57,851	-		MIT1002_04198	0.19	-0.1
57,907	-		MIT1002_04198	0.34	+1.6
57,924	-		MIT1002_04198	0.38	+0.1
57,930	+		MIT1002_04198	0.40	-0.3
57,975	-		MIT1002_04198	0.52	-1.0
58,004	+		MIT1002_04198	0.60	-2.2
58,048	-		MIT1002_04198	0.71	-0.7
58,094	+		MIT1002_04198	0.84	-2.6
58,120	+				+3.0
58,128	-				-0.1
58,201	+				-1.1
58,201	+				+1.9
58,201	+				-1.5
58,201	+				+1.6
58,201	+				+0.7
58,201	+				+0.8
58,201	+				-0.4
58,209	-				-0.8
58,209	-				+1.2
58,209	-				+0.4
58,209	-				-0.6
58,256	+		MIT1002_04199	0.15	-2.4
58,307	-		MIT1002_04199	0.23	+0.5
58,331	+		MIT1002_04199	0.26	-1.3
58,346	-		MIT1002_04199	0.29	+2.6
58,440	+		MIT1002_04199	0.43	-0.3
58,440	+		MIT1002_04199	0.43	-1.4
58,440	+		MIT1002_04199	0.43	-0.1
58,440	+		MIT1002_04199	0.43	+2.3
58,440	+		MIT1002_04199	0.43	-1.6
58,440	+		MIT1002_04199	0.43	+0.5
58,440	+		MIT1002_04199	0.43	-1.6
58,450	+		MIT1002_04199	0.45	+0.4
58,483	+		MIT1002_04199	0.50	-0.0
58,556	-		MIT1002_04199	0.62	-1.3
58,558	+		MIT1002_04199	0.62	+0.7
58,558	+		MIT1002_04199	0.62	-0.9
58,564	-		MIT1002_04199	0.63	+1.6
58,566	-		MIT1002_04199	0.63	-0.2
58,566	-		MIT1002_04199	0.63	-0.8
58,566	-		MIT1002_04199	0.63	-0.0
58,600	+		MIT1002_04199	0.68	+0.8
58,600	+		MIT1002_04199	0.68	-1.8
58,666	+		MIT1002_04199	0.79	-2.1
58,671	+		MIT1002_04199	0.79	+0.2
58,676	+		MIT1002_04199	0.80	+0.1
58,678	+		MIT1002_04199	0.81	+1.9
58,678	+		MIT1002_04199	0.81	+5.7
58,684	-		MIT1002_04199	0.82	-1.5
58,684	-		MIT1002_04199	0.82	-0.9
58,706	+		MIT1002_04199	0.85	-0.8
58,724	-		MIT1002_04199	0.88	+1.7
58,724	-		MIT1002_04199	0.88	-0.3
58,724	-		MIT1002_04199	0.88	-0.2
58,724	-		MIT1002_04199	0.88	-0.0
58,724	-		MIT1002_04199	0.88	+0.9
58,732	-		MIT1002_04199	0.89	-0.5
58,734	-		MIT1002_04199	0.89	-1.3
58,756	+				+1.2
58,830	-				-2.9
58,896	+				+0.4
58,952	+				-1.2
58,960	-				+0.7
58,960	-				-0.9
58,960	-				+0.6
58,969	-				+1.8
58,983	+				-0.2
58,996	-				+4.7
59,024	+				+0.3
59,047	-				-1.9
59,135	+				+1.1
59,137	-				-1.8
59,158	-				+0.1
59,321	+				-0.2
59,321	+				-0.3
59,329	-				-0.2
59,329	-				-0.6
59,329	-				-0.9
59,329	-				+0.7
59,345	+				-2.2
59,414	+				+0.4
59,422	-				+0.1
59,422	-				+0.4
59,465	-				+0.5
59,470	-				-0.5
59,478	+				-0.4
59,478	+				+2.3
59,478	+				-0.0
59,478	+				+0.2
59,478	+				-0.1
59,478	+				-0.5
59,478	+				+0.1
59,478	+				+0.8
59,486	-				+0.2
59,486	-				+0.5
59,486	-				-1.6
59,486	-				+0.4
59,486	-				+0.5
59,488	+				+0.3
59,488	+				+0.5
59,496	-				-0.0
59,501	+				+0.1
59,501	+				-1.8
59,520	-				+0.0
59,558	+				-1.0
59,645	+				-1.1
59,714	+				+1.0
59,760	+				+1.4
59,760	+				-0.7
59,769	+				+2.5