Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04145

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
9,311	+				-2.3
9,311	+				-0.8
9,311	+				+3.0
9,311	+				-3.1
9,311	+				+0.3
9,311	+				-0.1
9,311	+				-1.1
9,311	+				+1.1
9,311	+				-1.1
9,311	+				+0.5
9,319	-				-0.2
9,319	-				-0.9
9,319	-				+0.3
9,319	-				+0.5
9,319	-				+0.5
9,319	-				+1.2
9,319	-				-0.2
9,319	-				+1.0
9,319	-				+1.9
9,324	-				-0.2
9,340	-				+1.2
9,365	+				-1.5
9,365	+				-0.5
9,367	+				+0.7
9,368	-				-0.6
9,373	-				+1.1
9,373	-				-2.3
9,375	-				+0.3
9,408	-				-1.0
9,509	-				-1.1
9,511	+				+0.5
9,511	+				+1.2
9,627	-				+0.8
9,642	-				-0.8
9,689	+				-1.0
9,729	+		MIT1002_04144	0.20	+0.6
9,790	+		MIT1002_04144	0.38	+1.2
9,790	+		MIT1002_04144	0.38	-0.2
9,790	+		MIT1002_04144	0.38	-2.8
9,790	+		MIT1002_04144	0.38	-0.3
9,790	+		MIT1002_04144	0.38	-0.6
9,790	+		MIT1002_04144	0.38	-3.0
9,790	+		MIT1002_04144	0.38	+1.4
9,790	+		MIT1002_04144	0.38	+1.4
9,790	+		MIT1002_04144	0.38	+0.0
9,790	+		MIT1002_04144	0.38	+1.9
9,790	+		MIT1002_04144	0.38	+0.4
9,790	+		MIT1002_04144	0.38	-0.0
9,790	+		MIT1002_04144	0.38	-1.5
9,790	+		MIT1002_04144	0.38	-1.6
9,790	+		MIT1002_04144	0.38	+0.5
9,790	+		MIT1002_04144	0.38	+0.1
9,790	+		MIT1002_04144	0.38	-1.4
9,790	+		MIT1002_04144	0.38	+0.2
9,790	+		MIT1002_04144	0.38	-0.7
9,790	+		MIT1002_04144	0.38	-0.1
9,790	+		MIT1002_04144	0.38	-2.3
9,790	+		MIT1002_04144	0.38	-0.7
9,790	+		MIT1002_04144	0.38	-1.0
9,790	+		MIT1002_04144	0.38	+0.7
9,790	+		MIT1002_04144	0.38	-0.9
9,798	-		MIT1002_04144	0.41	+0.0
9,798	-		MIT1002_04144	0.41	-1.1
9,798	-		MIT1002_04144	0.41	-0.0
9,798	-		MIT1002_04144	0.41	-0.3
9,798	-		MIT1002_04144	0.41	-0.5
9,798	-		MIT1002_04144	0.41	-1.4
9,798	-		MIT1002_04144	0.41	+1.4
9,798	-		MIT1002_04144	0.41	-1.6
9,798	-		MIT1002_04144	0.41	+1.9
9,798	-		MIT1002_04144	0.41	+0.0
9,798	-		MIT1002_04144	0.41	+0.3
9,798	-		MIT1002_04144	0.41	+1.6
9,798	-		MIT1002_04144	0.41	+0.7
9,798	-		MIT1002_04144	0.41	-1.5
9,798	-		MIT1002_04144	0.41	-1.6
9,798	-		MIT1002_04144	0.41	-0.2
9,798	-		MIT1002_04144	0.41	+0.5
9,798	-		MIT1002_04144	0.41	+0.3
9,798	-		MIT1002_04144	0.41	-0.9
9,808	-		MIT1002_04144	0.44	-0.1
9,883	-		MIT1002_04144	0.66	-0.8
9,911	-		MIT1002_04144	0.75	+1.3
9,957	+		MIT1002_04144	0.89	-0.7
9,967	+				-1.1
10,076	+				-0.7
10,084	-				-0.7
10,247	-				+0.4
10,266	-				+0.1
10,281	+				+0.3
10,308	+		MIT1002_04145	0.15	-2.6
10,376	-		MIT1002_04145	0.80	-0.1
10,385	+		MIT1002_04145	0.89	-1.9
10,388	-				+1.2
10,388	-				+1.7
10,476	+				+2.5
10,538	+				+1.5
10,538	+				-0.9
10,538	+				-1.7
10,546	-				-0.0
10,546	-				-0.4
10,546	-				+2.5
10,546	-				+0.3
10,581	+				-0.9
10,589	+				+1.6
10,605	+				-2.1
10,659	+		MIT1002_04146	0.14	-0.0
10,667	-		MIT1002_04146	0.15	-0.1
10,762	-		MIT1002_04146	0.30	+0.2
10,789	+		MIT1002_04146	0.34	-0.7
10,797	-		MIT1002_04146	0.35	+0.5
10,797	-		MIT1002_04146	0.35	-1.7
10,797	-		MIT1002_04146	0.35	+0.0
10,797	-		MIT1002_04146	0.35	+0.7
10,797	-		MIT1002_04146	0.35	-0.0
10,882	+		MIT1002_04146	0.49	-0.0
11,015	-		MIT1002_04146	0.70	-1.0
11,042	+		MIT1002_04146	0.74	-0.0
11,042	+		MIT1002_04146	0.74	+0.8
11,042	+		MIT1002_04146	0.74	-1.7
11,129	+		MIT1002_04146	0.88	-0.6
11,140	+		MIT1002_04146	0.89	-0.7
11,154	+				-0.6
11,242	-				-0.7
11,264	-		MIT1002_04147	0.13	-1.0
11,277	-		MIT1002_04147	0.17	+0.4
11,277	-		MIT1002_04147	0.17	-3.2
11,386	+		MIT1002_04147	0.47	-0.2