Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03272

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
3,644,561	-		MIT1002_03271	0.63	-0.6
3,644,575	+		MIT1002_03271	0.63	-0.8
3,644,731	-		MIT1002_03271	0.73	+1.8
3,644,833	-		MIT1002_03271	0.79	-1.6
3,644,864	-		MIT1002_03271	0.81	+0.2
3,644,936	-		MIT1002_03271	0.85	-1.1
3,644,942	-		MIT1002_03271	0.85	-1.3
3,644,962	-		MIT1002_03271	0.87	-2.4
3,644,973	-		MIT1002_03271	0.87	+0.2
3,645,023	+				-1.5
3,645,035	+				-0.1
3,645,096	+				-1.5
3,645,103	-				+0.8
3,645,168	+				+0.8
3,645,176	-				+1.2
3,645,176	-				-0.2
3,645,176	-				-0.6
3,645,282	+				-1.3
3,645,306	+				-0.9
3,645,307	-				+0.1
3,645,313	+				-2.6
3,645,317	-				+1.5
3,645,326	-				+0.7
3,645,353	+				+0.0
3,645,353	+				-0.0
3,645,361	-				+0.6
3,645,361	-				-0.0
3,645,379	-				-0.7
3,645,441	+				+2.1
3,645,472	-				+1.7
3,645,491	+				+1.7
3,645,519	+				+1.2
3,645,556	-				+0.0
3,645,585	+				-1.1
3,645,585	+				-2.3
3,645,586	-				-0.4
3,645,593	+				-0.9
3,645,607	-				-0.3
3,645,632	+				-0.3
3,645,640	-				+0.4
3,645,640	-				-1.7
3,645,640	-				+2.7
3,645,640	-				-1.1
3,645,640	-				+1.0
3,645,684	-				-1.7
3,645,788	-		MIT1002_03272	0.15	-0.9
3,645,823	+		MIT1002_03272	0.17	+1.6
3,645,858	-		MIT1002_03272	0.19	-0.7
3,645,867	+		MIT1002_03272	0.20	+1.6
3,645,867	+		MIT1002_03272	0.20	+1.2
3,645,882	-		MIT1002_03272	0.21	+1.2
3,645,888	+		MIT1002_03272	0.21	+2.1
3,645,888	+		MIT1002_03272	0.21	-0.2
3,645,896	-		MIT1002_03272	0.22	+4.1
3,645,898	+		MIT1002_03272	0.22	-0.3
3,645,906	-		MIT1002_03272	0.22	-0.9
3,645,906	-		MIT1002_03272	0.22	+0.3
3,645,945	+		MIT1002_03272	0.24	+1.0
3,645,951	-		MIT1002_03272	0.25	+1.2
3,645,972	+		MIT1002_03272	0.26	-0.3
3,645,980	+		MIT1002_03272	0.26	-0.7
3,646,009	+		MIT1002_03272	0.28	+1.1
3,646,015	-		MIT1002_03272	0.29	-1.3
3,646,024	+		MIT1002_03272	0.29	+1.2
3,646,029	+		MIT1002_03272	0.29	+1.7
3,646,032	-		MIT1002_03272	0.30	+1.4
3,646,060	+		MIT1002_03272	0.31	-0.8
3,646,067	+		MIT1002_03272	0.32	+0.9
3,646,068	-		MIT1002_03272	0.32	+0.8
3,646,136	+		MIT1002_03272	0.36	-0.5
3,646,145	+		MIT1002_03272	0.36	-1.3
3,646,205	-		MIT1002_03272	0.40	-1.2
3,646,249	-		MIT1002_03272	0.42	-0.6
3,646,258	+		MIT1002_03272	0.43	-0.8
3,646,269	+		MIT1002_03272	0.43	+0.9
3,646,273	+		MIT1002_03272	0.44	-0.2
3,646,312	+		MIT1002_03272	0.46	-1.9
3,646,321	-		MIT1002_03272	0.46	-1.7
3,646,363	-		MIT1002_03272	0.49	+3.6
3,646,363	-		MIT1002_03272	0.49	+0.0
3,646,445	+		MIT1002_03272	0.54	-0.7
3,646,489	-		MIT1002_03272	0.56	-1.6
3,646,498	-		MIT1002_03272	0.57	+0.6
3,646,542	+		MIT1002_03272	0.59	-0.3
3,646,548	+		MIT1002_03272	0.60	-0.8
3,646,557	+		MIT1002_03272	0.60	+1.0
3,646,598	-		MIT1002_03272	0.63	+0.5
3,646,639	-		MIT1002_03272	0.65	-1.4
3,646,658	+		MIT1002_03272	0.66	+1.5
3,646,663	-		MIT1002_03272	0.67	+1.2
3,646,727	+		MIT1002_03272	0.70	-0.5
3,646,762	+		MIT1002_03272	0.72	+0.5
3,646,762	+		MIT1002_03272	0.72	-1.4
3,646,800	+		MIT1002_03272	0.75	+2.9
3,646,807	+		MIT1002_03272	0.75	-0.3
3,646,815	-		MIT1002_03272	0.75	-0.1
3,646,867	-		MIT1002_03272	0.79	-0.9
3,646,880	+		MIT1002_03272	0.79	-0.4
3,646,902	+		MIT1002_03272	0.81	+1.0
3,646,902	+		MIT1002_03272	0.81	+1.5
3,646,902	+		MIT1002_03272	0.81	-0.6
3,646,903	-		MIT1002_03272	0.81	+0.1
3,646,910	-		MIT1002_03272	0.81	-1.0
3,646,999	+		MIT1002_03272	0.86	+0.5
3,647,091	-				-0.4
3,647,107	+				+1.2
3,647,115	-				+2.4
3,647,174	-				+0.3
3,647,220	-				-0.8
3,647,296	-				+0.2
3,647,457	+		MIT1002_03273	0.16	+1.5
3,647,483	-		MIT1002_03273	0.19	+1.9
3,647,490	+		MIT1002_03273	0.19	+0.2
3,647,498	-		MIT1002_03273	0.20	-0.9
3,647,498	-		MIT1002_03273	0.20	-1.2
3,647,498	-		MIT1002_03273	0.20	+0.0
3,647,498	-		MIT1002_03273	0.20	+1.2
3,647,529	-		MIT1002_03273	0.22	-0.9
3,647,687	+		MIT1002_03273	0.35	+0.3
3,647,749	-		MIT1002_03273	0.41	-1.1
3,647,749	-		MIT1002_03273	0.41	+0.4
3,647,749	-		MIT1002_03273	0.41	+1.2
3,647,863	-		MIT1002_03273	0.50	+0.5
3,647,897	+		MIT1002_03273	0.53	-0.5
3,647,968	+		MIT1002_03273	0.59	-2.2
3,647,975	+		MIT1002_03273	0.59	-0.9
3,647,975	+		MIT1002_03273	0.59	+1.0
3,647,975	+		MIT1002_03273	0.59	+0.3
3,647,976	-		MIT1002_03273	0.59	-1.3
3,647,983	-		MIT1002_03273	0.60	+0.4
3,648,047	-		MIT1002_03273	0.65	-1.4
3,648,103	+		MIT1002_03273	0.70	-1.7
3,648,103	+		MIT1002_03273	0.70	+2.0
3,648,134	+		MIT1002_03273	0.73	-1.2
3,648,173	+		MIT1002_03273	0.76	-0.0
3,648,181	-		MIT1002_03273	0.76	+2.6
3,648,214	+		MIT1002_03273	0.79	-0.2